RNA–Protein interactions for RNA: ENST00000343200.9

VCAN-203, Transcript of versican, humanhuman

TSL 1 (best) BASIC

Gene VCAN, Length 9,455 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-203ENST00000343200 DLX1P56177 255 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TRA2BP62995 288 aaKnown RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 LYSMD4Q5XG99 296 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 VGLL2Q8N8G2 317 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR1L6Q8NGR2 347 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 NIPSNAP1Q9BPW8 284 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TMEM204Q9BSN7 226 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SLC17A5Q9NRA2 495 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 KIAA1671Q9BY89 1806 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 CYR61O00622 381 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TAPBPO15533 448 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR1D5P58170 312 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SMAGPQ0VAQ4 97 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 USP53Q70EK8 1073 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 GATSQ8NAP1 163 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR2T6Q8NHC8 308 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 MGST2Q99735 147 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 IFITM5A6NNB3 132 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SULT2B1O00204 365 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ZNF593O00488 134 aaPredicted RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 PGA3P0DJD8 388 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 CLN3Q13286 438 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 FRMPD2BQ6IN97 320 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 RHBDD2Q6NTF9 364 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 CLEC18BQ6UXF7 455 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ZNF595Q8IYB9 648 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR5M9Q8NGP3 310 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR5M1Q8NGP8 315 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ACER1Q8TDN7 264 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 RAB7BQ96AH8 199 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OBP2BQ9NPH6 170 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 PSENENQ9NZ42 101 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 FOXJ3Q9UPW0 622 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 LSM2Q9Y333 95 aaKnown RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 PPP1R11O60927 126 aaPredicted RBP5.62□□□□□ -1.51
VCAN-203ENST00000343200 TYMSP04818 313 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TBXA2RP21731 343 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 GALP22466 123 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 RHOBP62745 196 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 RING1Q06587 406 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SHBQ15464 509 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ADIPOQQ15848 244 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 PNLIPRP3Q17RR3 467 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 LEXMQ3ZCV2 418 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SLC25A34Q6PIV7 304 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 NANOGP1Q8N7R0 232 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR52B4Q8NGK2 314 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR10X1Q8NGY0 326 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 FBXO17Q96EF6 278 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 CHRNA10Q9GZZ6 450 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 GSN-AS1Q9NRJ2 163 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 WIPI2Q9Y4P8 454 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SPCS1Q9Y6A9 102 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 MSCO60682 206 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 FUT1P19526 365 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 UQCRFS1P47985 274 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 FAM78BQ5VT40 261 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 HMGN2P46Q86SG4 172 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ZDHHC22Q8N966 263 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 SLCO4A1Q96BD0 722 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 OR2A14Q96R47 310 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 BARHL1Q9BZE3 327 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 MSL2Q9HCI7 577 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 UFC1Q9Y3C8 167 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 IFITM10A6NMD0 228 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ZBTB42B2RXF5 422 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 H3BML4 177 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 LEFTY1O75610 366 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 NXPH2O95156 264 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 CLDN18P56856 261 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ZXDBP98169 803 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 HLA-DRB5Q30154 266 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TPRG1Q6ZUI0 275 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 LRRC18Q8N456 261 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ZNF583Q96ND8 569 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 TMPRSS13Q9BYE2 586 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 ZNF355PQ9NSJ1 428 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 CLEC2DQ9UHP7 191 aa5.62□□□□□ -1.51
VCAN-203ENST00000343200 IGSF23A1L1A6 192 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 OR5B21A6NL26 309 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ARNTLO00327 626 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 GALR2O43603 387 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 SOD1P00441 154 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 FCGR3AP08637 254 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 IL1RNP18510 177 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 RELQ04864 619 aaPredicted RBP5.61□□□□□ -1.51
VCAN-203ENST00000343200 OLIG2Q13516 323 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 TMEM65Q6PI78 240 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SLC35E3Q7Z769 313 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 CLECL1Q8IZS7 167 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 NEURL3Q96EH8 262 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ELOVL5Q9NYP7 299 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 FLRT3Q9NZU0 649 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 TBX21Q9UL17 535 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 C2CD3Q4AC94 2353 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 FEZF1A0PJY2 475 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 IL4P05112 153 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 SP1P08047 785 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 ANKRD34CP0C6C1 535 aa5.61□□□□□ -1.51
VCAN-203ENST00000343200 LURAP1LQ8IV03 231 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms