RNA–Protein interactions for RNA: ENST00000341485.9

TPM3-208, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,063 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-208ENST00000341485 SORDQ00796 357 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 DHRS2Q13268 280 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 PGAP1Q75T13 922 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 DOK3Q7L591 496 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 TMEM104Q8NE00 496 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 STEAP2Q8NFT2 490 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 OR2M7Q8NG81 312 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 MARVELD3Q96A59 401 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 PRRT1Q99946 306 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 NUDT16L1Q9BRJ7 211 aaKnown RBP13.18□□□□□ -0.3
TPM3-208ENST00000341485 KCNN3Q9UGI6 736 aa13.18□□□□□ -0.3
TPM3-208ENST00000341485 TRAV14DV4A0A0A6YYC5 116 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 TUBAL3A6NHL2 446 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 GJE1A6NN92 205 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 GFRA3O60609 400 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 RFPL3SP0C7P2 107 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 PPP3CBP16298 524 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 MSR1P21757 451 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 ENDOGQ14249 297 aaKnown RBP13.17□□□□□ -0.3
TPM3-208ENST00000341485 C10orf128Q5T292 105 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 OR2W3Q7Z3T1 314 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 CCDC28AQ8IWP9 274 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 OR14K1Q8NGZ2 314 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 ASB13Q8WXK3 278 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 HES7Q9BYE0 225 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 ARL6Q9H0F7 186 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 IFT46Q9NQC8 304 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 B4GALT7Q9UBV7 327 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 ZNF230Q9UIE0 474 aaPredicted RBP13.17□□□□□ -0.3
TPM3-208ENST00000341485 KCNK7Q9Y2U2 307 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 KIAA1549Q9HCM3 1950 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 LOC100509620A0A075B734 347 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 IGKV1-9A0A0C4DH69 117 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 OR5H15A6NDH6 313 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 MPIG6BO95866 241 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 RRASP10301 218 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 CTSSP25774 331 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 HRH1P35367 487 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 ZNF133P52736 654 aaPredicted RBP13.17□□□□□ -0.3
TPM3-208ENST00000341485 AP2S1P53680 142 aaPredicted RBP13.17□□□□□ -0.3
TPM3-208ENST00000341485 RAC1P63000 192 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 CLN3Q13286 438 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
TPM3-208ENST00000341485 FOXL2NBQ6ZUU3 175 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 NAA40Q86UY6 237 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 SLC25A42Q86VD7 318 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 SULF2Q8IWU5 870 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 TMEM123Q8N131 208 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 SSC4DQ8WTU2 575 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 KCNE4Q8WWG9 221 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 NABP1Q96AH0 204 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 LYZL4Q96KX0 146 aa13.17□□□□□ -0.3
TPM3-208ENST00000341485 CDK2AP1O14519 115 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 SMAD9O15198 467 aaKnown RBP13.16□□□□□ -0.3
TPM3-208ENST00000341485 CDC14BO60729 498 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 EIF1BO60739 113 aaKnown RBP13.16□□□□□ -0.3
TPM3-208ENST00000341485 RP2O75695 350 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 IGLV3-1P01715 115 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 PDGFAP04085 211 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 HCKP08631 526 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 NR2C1P13056 603 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 ZBTB25P24278 435 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 CD34P28906 385 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 ARG2P78540 354 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 RIPPLY1Q0D2K3 151 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 ZMYND11Q15326 602 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 AANATQ16613 207 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 WIPI1Q5MNZ9 446 aaPredicted RBP13.16□□□□□ -0.3
TPM3-208ENST00000341485 OR9K2Q8NGE7 335 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 SLC39A7Q92504 469 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 PGAM5Q96HS1 289 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 CYYR1Q96J86 154 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 NELFAQ9H3P2 528 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 BANF2Q9H503 90 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 KIF25Q9UIL4 384 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 A0A0J9YW62 118 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 A0A1W2PP11 408 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 RFPL4AA6NLU0 287 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 ZNF891A8MT65 544 aaPredicted RBP13.16□□□□□ -0.3
TPM3-208ENST00000341485 NPIPA2E9PIF3 369 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 RFPL4AL1F8VTS6 287 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 NPIPA3F8WFD2 350 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 I3L521 148 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 SHOXO15266 292 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 SOCS1O15524 211 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 B3GALNT1O75752 331 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 HLA-AP01891 365 aaKnown RBP13.16□□□□□ -0.3
TPM3-208ENST00000341485 CHRM2P08172 466 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 WT1P19544 449 aaPredicted RBP13.16□□□□□ -0.3
TPM3-208ENST00000341485 CCL11P51671 97 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 SOX8P57073 446 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 GMFBP60983 142 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 CSNK2A1P68400 391 aaPredicted RBP13.16□□□□□ -0.3
TPM3-208ENST00000341485 PLGLB1Q02325 96 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 FOXO1Q12778 655 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 PLAC9Q5JTB6 97 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 CLVS2Q5SYC1 327 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 ZDHHC22Q8N966 263 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 OR5M8Q8NGP6 311 aa13.16□□□□□ -0.3
TPM3-208ENST00000341485 KCNG3Q8TAE7 436 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms