RNA–Protein interactions for RNA: ENST00000339865.9

USP47-202, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2 BASIC

Gene USP47, Length 7,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-202ENST00000339865 TMEM64Q6YI46 380 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 KMT5CQ86Y97 462 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 ZNF383Q8NA42 475 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 EPHX3Q9H6B9 360 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 WDR81Q562E7 1941 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 LOC389332A0A1B0GUA5 103 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 PPP6CO00743 305 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 CST9Q5W186 159 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 SIGIRRQ6IA17 410 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 LHFPL2Q6ZUX7 228 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 EVA1AQ9H8M9 152 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 MS4A18H0YCH9 400 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 MFNGO00587 321 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 NRASP01111 189 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 CYC1P08574 325 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 DCAF7P61962 342 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 MS4A18Q3C1V0 323 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 GPRIN1Q7Z2K8 1008 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 MOB3BQ86TA1 216 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 ETFBKMTQ8IXQ9 262 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 OR6S1Q8NH40 331 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 MCHR2Q969V1 340 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 Q96M85 177 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 RNF186Q9NXI6 227 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 WSB1Q9Y6I7 421 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 EIF1BO60739 113 aaKnown RBP11.67□□□□□ -0.54
USP47-202ENST00000339865 KRASP01116 189 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 PKIAP61925 76 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 LYG2Q86SG7 212 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 MED13LQ71F56 2210 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 ZNF840PA6NDX5 716 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 AGFG2O95081 481 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 SOX4Q06945 474 aaPredicted RBP11.67□□□□□ -0.54
USP47-202ENST00000339865 RUNX3Q13761 415 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 OR14A16Q8NHC5 309 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 HGDQ93099 445 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 PACRGQ96M98 296 aaPredicted RBP11.67□□□□□ -0.54
USP47-202ENST00000339865 DUSP23Q9BVJ7 150 aa11.67□□□□□ -0.54
USP47-202ENST00000339865 CA2P00918 260 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 FGF8P55075 233 aaPredicted RBP11.66□□□□□ -0.54
USP47-202ENST00000339865 COL9A3Q14050 684 aaPredicted RBP11.66□□□□□ -0.54
USP47-202ENST00000339865 IHHQ14623 411 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 OR5AU1Q8NGC0 362 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 NAA60Q9H7X0 242 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 PITPNC1Q9UKF7 332 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 MEGF6O75095 1541 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 ZNF841Q6ZN19 808 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 RSG1Q9BU20 258 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 C20orf141Q9NUB4 165 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 DOK5Q9P104 306 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 CD3DP04234 171 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 CLDN20P56880 219 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 FER1L6-AS2Q96M78 137 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 AKAP12Q02952 1782 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 PTPRUQ92729 1446 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 CLDN34H7C241 214 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 AKR7A3O95154 331 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 ARG1P05089 322 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 ANKRD34CP0C6C1 535 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 LHX3Q9UBR4 397 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 M0R1B8 84 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 SNRPGP62308 76 aaKnown RBP11.66□□□□□ -0.54
USP47-202ENST00000339865 DUSP2Q05923 314 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 SLC35D3Q5M8T2 416 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 OR4F17Q8NGA8 305 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 OR52N1Q8NH53 320 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 OPALINQ96PE5 141 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 SLC25A22Q9H936 323 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 DYSFO75923 2080 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 GFRA2O00451 464 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 CD68P34810 354 aaPredicted RBP11.66□□□□□ -0.54
USP47-202ENST00000339865 GDF7Q7Z4P5 450 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 NUDCD2Q8WVJ2 157 aa11.66□□□□□ -0.54
USP47-202ENST00000339865 SNRPGP15A8MWD9 76 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 CYS1Q717R9 158 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 OR51E1Q8TCB6 317 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 A0A1B0GUH1 482 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 A0A1B0GWA3 101 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 PRSS38A1L453 326 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 ARNTLO00327 626 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 SUOXP51687 545 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 LIPNQ5VXI9 398 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 C11orf87Q6NUJ2 197 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 ZNF519Q8TB69 540 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 CLEC1BQ9P126 229 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 ZXDAP98168 799 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 SEMA3BQ13214 749 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 C5orf46Q6UWT4 87 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 PIANPQ8IYJ0 282 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 MASP2O00187 686 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 ZNF253O75346 499 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 NAT2P11245 290 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 LAIR1Q6GTX8 287 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 OR52N4Q8NGI2 321 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 PHRF1Q9P1Y6 1649 aaKnown RBP11.65□□□□□ -0.54
USP47-202ENST00000339865 C1orf167Q5SNV9 1468 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 ZBTB25P24278 435 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 CLN3Q13286 438 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 D2HGDHQ8N465 521 aa11.65□□□□□ -0.54
USP47-202ENST00000339865 H0YGG7 62 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms