RNA–Protein interactions for RNA: ENST00000337354.8

SEC13-201, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SEC13, Length 1,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-201ENST00000337354 MRPS11P82912 194 aaKnown RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 CDK5R1Q15078 307 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ODF4Q2M2E3 257 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 KCTD21Q4G0X4 260 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 SHEQ5VZ18 495 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 CELF2-AS1Q8N7Q2 184 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 RPS4Y2Q8TD47 263 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 SMIM19Q96E16 107 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ELMOD3Q96FG2 381 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 SOX7Q9BT81 388 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 CXXC4Q9H2H0 198 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ENPP5Q9UJA9 477 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ROS1P08922 2347 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 RTTNQ86VV8 2226 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 TRIM64A6NGJ6 449 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ANXA2P2A6NMY6 339 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 TPD52L2O43399 206 aaKnown RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 PLPP2O43688 288 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 NDUFS7O75251 213 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 LALBAP00709 142 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 IGHV4-39P01824 125 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 MAGEB1P43366 347 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 SRP9P49458 86 aaKnown RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 CHN2P52757 468 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 CDH15P55291 814 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 DSCR9P59020 149 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 CCL8P80075 99 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 TNFAIP6P98066 277 aaPredicted RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 GPR50Q13585 617 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 MED22Q15528 200 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 TESK1Q15569 626 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 OR8G1Q15617 311 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 TBCEQ15813 527 aaPredicted RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 TSTQ16762 297 aaKnown RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 DMKNQ6E0U4 476 aaPredicted RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 RDH10Q8IZV5 341 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 SVOPQ8N4V2 548 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 GTF3AQ92664 365 aaKnown RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 RDH5Q92781 318 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 HIST1H2AAQ96QV6 131 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 SAP30LQ9HAJ7 183 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 ISYNA1Q9NPH2 558 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 PIGLQ9Y2B2 252 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 LSM2Q9Y333 95 aaKnown RBP13.07□□□□□ -0.32
SEC13-201ENST00000337354 RHBDD3Q9Y3P4 386 aa13.07□□□□□ -0.32
SEC13-201ENST00000337354 LOC107986453A0A1B0GWG9 222 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 MLNRO43193 412 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 TNFAIP8O95379 198 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 SERPINA3P01011 423 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 HLA-DPB1P04440 258 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 CRYBB2P43320 205 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 XAF1Q6GPH4 301 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 OR8S1Q8NH09 359 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 UBASH3BQ8TF42 649 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 PIGCQ92535 297 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 ERGIC1Q969X5 290 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 OR5M11Q96RB7 305 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 PDCD1LG2Q9BQ51 273 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 PAPOLGQ9BWT3 736 aaKnown RBP13.06□□□□□ -0.32
SEC13-201ENST00000337354 PLEKHA1Q9HB21 404 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 DLL4Q9NR61 685 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 C14orf119Q9NWQ9 140 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 ZNF281Q9Y2X9 895 aa13.06□□□□□ -0.32
SEC13-201ENST00000337354 OTOGQ6ZRI0 2925 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 SSX4O60224 188 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 HPXP02790 462 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 CSF3P09919 207 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 DAOP14920 347 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 CELP19835 753 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 CD200P41217 278 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 EMX1Q04741 257 aaPredicted RBP13.05□□□□□ -0.32
SEC13-201ENST00000337354 YIF1BQ5BJH7 314 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 CLVS2Q5SYC1 327 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 TMEM42Q69YG0 159 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 SPARTQ8N0X7 666 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 GPR148Q8TDV2 347 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 PP6455Q8WZ26 134 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 GHSRQ92847 366 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 TECTBQ96PL2 329 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 OR2V2Q96R30 315 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 MICU1Q9BPX6 476 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 ADAT1Q9BUB4 502 aaKnown RBP13.05□□□□□ -0.32
SEC13-201ENST00000337354 ACOT13Q9NPJ3 140 aa13.05□□□□□ -0.32
SEC13-201ENST00000337354 ZNF275Q9NSD4 429 aaPredicted RBP13.05□□□□□ -0.32
SEC13-201ENST00000337354 SIRT4Q9Y6E7 314 aaPredicted RBP13.05□□□□□ -0.32
SEC13-201ENST00000337354 PLCE1Q9P212 2302 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 ZNF850A8MQ14 1090 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 F5H5P2 479 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 H0YL77 283 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 IFNL4K9M1U5 179 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 PTBP3O95758 552 aaKnown RBP13.04□□□□□ -0.32
SEC13-201ENST00000337354 NRASP01111 189 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 FAHP16930 419 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 GATA4P43694 442 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 SLC3A1Q07837 685 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 MLLT11Q13015 90 aaPredicted RBP13.04□□□□□ -0.32
SEC13-201ENST00000337354 PRDX4Q13162 271 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 MAB21L1Q13394 359 aa13.04□□□□□ -0.32
SEC13-201ENST00000337354 CEACAM21Q3KPI0 293 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms