RNA–Protein interactions for RNA: ENST00000336180.6

LIMK1-201, Transcript of LIM domain kinase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMK1, Length 3,219 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-201ENST00000336180 FAM230AA0A1W2PPH8 454 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF716A6NP11 495 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 M0R135 149 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 GSTZ1O43708 216 aaPredicted RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 VSIG10L2P0DP72 767 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SERPINA2P20848 420 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 RBMXP38159 391 aaKnown RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF528Q3MIS6 628 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 RNFT1Q5M7Z0 435 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 OR5AS1Q8N127 324 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SUMF1Q8NBK3 374 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 OR5D14Q8NGL3 314 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SEH1LQ96EE3 360 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF799Q96GE5 643 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 NIPAL2Q9H841 368 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 TMEM138Q9NPI0 162 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 LUZP4Q9P127 313 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF230Q9UIE0 474 aaPredicted RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 ZNF318Q5VUA4 2279 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 IGHEP01854 428 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 HLA-HP01893 362 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 CNR1P21554 472 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 HTR5AP47898 357 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 MAB21L1Q13394 359 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 GALNT11Q8NCW6 608 aa11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SAV1Q9H4B6 383 aaPredicted RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 MRPS28Q9Y2Q9 187 aaKnown RBP11.03□□□□□ -0.64
LIMK1-201ENST00000336180 SMG1Q96Q15 3661 aaKnown RBP11.02□□□□□ -0.64
LIMK1-201ENST00000336180 SPRY1O43609 319 aaPredicted RBP11.02□□□□□ -0.64
LIMK1-201ENST00000336180 AMY2AP04746 511 aa11.02□□□□□ -0.64
LIMK1-201ENST00000336180 FTH1P19P0C7X4 201 aa11.02□□□□□ -0.64
LIMK1-201ENST00000336180 ACKR3P25106 362 aa11.02□□□□□ -0.64
LIMK1-201ENST00000336180 MEOX1P50221 254 aa11.02□□□□□ -0.64
LIMK1-201ENST00000336180 CDNFQ49AH0 187 aa11.02□□□□□ -0.64
LIMK1-201ENST00000336180 FJX1Q86VR8 437 aa11.02□□□□□ -0.64
LIMK1-201ENST00000336180 MGAT4AQ9UM21 535 aa11.02□□□□□ -0.64
LIMK1-201ENST00000336180 A0A0A6YYD4 124 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 H7C417 338 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 RNF224P0DH78 156 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF84P51523 738 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 CDK10Q15131 360 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 UBE2V2Q15819 145 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF239Q16600 458 aaKnown RBP11.02□□□□□ -0.65
LIMK1-201ENST00000336180 BEND4Q6ZU67 534 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 TRAPPC6BQ86SZ2 158 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 SKA3Q8IX90 412 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 GJC3Q8NFK1 279 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 TMEM54Q969K7 222 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 LDAHQ9H6V9 325 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 SLC7A10Q9NS82 523 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 PRR13Q9NZ81 148 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 MGAT4CQ9UBM8 478 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 MTFP1Q9UDX5 166 aa11.02□□□□□ -0.65
LIMK1-201ENST00000336180 NPIPB13A6NJU9 1138 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 NPIPB4C9JG80 1138 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 SGCEO43556 437 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 ISG15P05161 165 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 YES1P07947 543 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 FCGR2AP12318 317 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 CDH24Q86UP0 819 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 SORCS2Q96PQ0 1159 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF703Q9H7S9 590 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-201ENST00000336180 FOXD3Q9UJU5 478 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-201ENST00000336180 BOKQ9UMX3 212 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-201ENST00000336180 PMP2P02689 132 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 PI3P19957 117 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 CASRP41180 1078 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 PPIAP62937 165 aaKnown RBP11.01□□□□□ -0.65
LIMK1-201ENST00000336180 ARG2P78540 354 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 CSRP2Q16527 193 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 ELFN2Q5R3F8 820 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 STEAP1BQ6NZ63 245 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 SLC16A14Q7RTX9 510 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 GCNT2Q8N0V5 402 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 GABRG1Q8N1C3 465 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 ADPRHL1Q8NDY3 354 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 BHLHE23Q8NDY6 225 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 DYRK2Q92630 601 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 POM121CA8CG34 1229 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 CTDSPLO15194 276 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 RAB3DO95716 219 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 GZMKP49863 264 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 GFRA1P56159 465 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 S100A12P80511 92 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 LAMTOR1Q6IAA8 161 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 DEGS2Q6QHC5 323 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 OR2T35Q8NGX2 323 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 DEDD2Q8WXF8 326 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 FOXB1Q99853 325 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 ZPBPQ9BS86 351 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 TRAF4Q9BUZ4 470 aaPredicted RBP11.01□□□□□ -0.65
LIMK1-201ENST00000336180 RHBDD3Q9Y3P4 386 aa11.01□□□□□ -0.65
LIMK1-201ENST00000336180 FAM221AA4D161 298 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 ZNF503-AS2A6NEH8 195 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 RAB27BO00194 218 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 GABRR1P24046 479 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 RPP30P78346 268 aaKnown RBP11□□□□□ -0.65
LIMK1-201ENST00000336180 PSG4Q00888 419 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 DYRK1AQ13627 763 aa11□□□□□ -0.65
LIMK1-201ENST00000336180 NKAPLQ5M9Q1 402 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms