RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 C7orf77A4D0Y5 90 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 MS4A18H0YCH9 400 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 TCAPO15273 167 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 FBXO24O75426 580 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 OR2J2O76002 312 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 DXOO77932 396 aaKnown RBP12.32□□□□□ -0.44
SF1-202ENST00000334944 MT-ND4LP03901 98 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 CD1AP06126 327 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 CELA2AP08217 269 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 SNRPCP09234 159 aaKnown RBP12.32□□□□□ -0.44
SF1-202ENST00000334944 KLK2P20151 261 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 STARD6P59095 220 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 EGR3Q06889 387 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 MS4A18Q3C1V0 323 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 ACTBL2Q562R1 376 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 GFI1BQ5VTD9 330 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 ZNF679Q8IYX0 411 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 OR4S1Q8NGB4 309 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 NKD1Q969G9 470 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 TMEM14AQ9Y6G1 99 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 A0A1W2PNR3 127 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 A0A1W2PQD3 144 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 K7ESF4 209 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 EFNA2O43921 213 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 RAB3DO95716 219 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 FAM157CP0CG43 387 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 COX5BP10606 129 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 TPT1P13693 172 aaKnown RBP12.32□□□□□ -0.44
SF1-202ENST00000334944 CARD17Q5XLA6 110 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 ZNF585AQ6P3V2 769 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 ZNF227Q86WZ6 799 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 DNASE2BQ8WZ79 361 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 HLA-CQ95604 372 aa12.32□□□□□ -0.44
SF1-202ENST00000334944 JSRP1Q96MG2 331 aaPredicted RBP12.32□□□□□ -0.44
SF1-202ENST00000334944 A0A087X0M5 115 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 A0A1B0GX30 115 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 MED6O75586 246 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 CD8AP01732 235 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 TLE3Q04726 772 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 KIAA0141Q14154 515 aaPredicted RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 C2orf76Q3KRA6 126 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 PHF19Q5T6S3 580 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 PRAMEF20Q5VT98 475 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 RHBDD2Q6NTF9 364 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 GABRG1Q8N1C3 465 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 EID2Q8N6I1 236 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 SLC25A43Q8WUT9 341 aaPredicted RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 SOX7Q9BT81 388 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 EGLN1Q9GZT9 426 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 CDV3Q9UKY7 258 aaKnown RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 MMP24Q9Y5R2 645 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 AHCTF1Q8WYP5 2266 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 EML6Q6ZMW3 1958 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 TRBV5-7A0A0A0MS05 114 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 MED19A0JLT2 244 aaPredicted RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 C9orf170A2RU37 121 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 DBX1A6NMT0 343 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 NPIPA5E9PKD4 350 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 PMS2P2O95744 297 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 MT-ATP6P00846 226 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 RAB40ALP0C0E4 278 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 RBP2P50120 134 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 GLO1Q04760 184 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 ZNF345Q14585 488 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 RAB40AQ8WXH6 277 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 PHYHIPQ92561 330 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 MCHR2Q969V1 340 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 OCSTAMPQ9BR26 566 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 ALX4Q9H161 411 aaPredicted RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 ATG5Q9H1Y0 275 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 FAM86C1Q9NVL1 165 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 GFOD1Q9NXC2 390 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 ZDHHC8Q9ULC8 765 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 NPIPA1Q9UND3 350 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 DHDHQ9UQ10 334 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 FTCDNL1E5RQL4 147 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 SOX15O60248 233 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 LRP3O75074 770 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 CSF1P09603 554 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 S100A2P29034 98 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 SFTPDP35247 375 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 RPS10P46783 165 aaKnown RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 EMP2P54851 167 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 SLC26A5P58743 744 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 RASGEF1BQ0VAM2 473 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 GLYATL3Q5SZD4 288 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 WDR74Q6RFH5 385 aaPredicted RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 ZNF627Q7L945 461 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 FOXRED2Q8IWF2 684 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 PAQR4Q8N4S7 273 aaPredicted RBP12.31□□□□□ -0.44
SF1-202ENST00000334944 JAGN1Q8N5M9 183 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 UBAC2Q8NBM4 344 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 ZNF248Q8NDW4 579 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 OR4K17Q8NGC6 315 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 OCIAD1Q9NX40 245 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 AMDHD2Q9Y303 409 aa12.31□□□□□ -0.44
SF1-202ENST00000334944 G3V3Y1 287 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms