RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TMEM50BP56557 158 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 ECH1Q13011 328 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 HOGA1Q86XE5 327 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 TMEM123Q8N131 208 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 OR51T1Q8NGJ9 327 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 OR1S1Q8NH92 325 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 ULBP2Q9BZM5 246 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 SPEF1Q9Y4P9 236 aa15.57■□□□□ 0.08
LRCH3-201ENST00000334859 DHHO43323 396 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 DUS4LO95620 317 aaKnown RBP15.56■□□□□ 0.08
LRCH3-201ENST00000334859 AMY2BP19961 511 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 FOLR3P41439 243 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 NPY4RP50391 375 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 FAM189A2Q15884 450 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 KCNRGQ8N5I3 272 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 OR10K1Q8NGX5 313 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 TERB2Q8NHR7 220 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 FBXW5Q969U6 566 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 NABP1Q96AH0 204 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF775Q96BV0 537 aaPredicted RBP15.56■□□□□ 0.08
LRCH3-201ENST00000334859 DMRTA2Q96SC8 542 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 PLEK2Q9NYT0 353 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 C5orf51A6NDU8 294 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 STMND1H3BQB6 276 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 MFNGO00587 321 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 DHRS3O75911 302 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 OR2F2O95006 317 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 DBHP09172 617 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 SLC25A4P12235 298 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 HOXA6P31267 233 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 PTGFRP43088 359 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 LUMP51884 338 aaPredicted RBP15.56■□□□□ 0.08
LRCH3-201ENST00000334859 TAS2R31P59538 309 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 OR2F1Q13607 317 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF345Q14585 488 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 ACTBL2Q562R1 376 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 FAM74A1Q5RGS3 127 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 JMJD6Q6NYC1 403 aaPredicted RBP15.56■□□□□ 0.08
LRCH3-201ENST00000334859 C1QL2Q7Z5L3 287 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 WDR5BQ86VZ2 330 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 SLC38A6Q8IZM9 456 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 ARMC10Q8N2F6 343 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 OR5H2Q8NGV7 314 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 IER2Q9BTL4 223 aa15.56■□□□□ 0.08
LRCH3-201ENST00000334859 ELL3Q9HB65 397 aaPredicted RBP15.56■□□□□ 0.08
LRCH3-201ENST00000334859 A0A0J9YW62 118 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 C13orf42A0A1B0GVH6 325 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 M0R135 149 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 NTN3O00634 580 aaPredicted RBP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 BCL2L11O43521 198 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 CD63P08962 238 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 SERPINA2P20848 420 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 CTSSP25774 331 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 THBS4P35443 961 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 PNLIPRP3Q17RR3 467 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF468Q5VIY5 522 aaPredicted RBP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 MAML2Q8IZL2 1156 aaPredicted RBP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 THAP6Q8TBB0 222 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 SSC4DQ8WTU2 575 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF799Q96GE5 643 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 CDX2Q99626 313 aaPredicted RBP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF471Q9BX82 626 aaPredicted RBP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 WDR13Q9H1Z4 485 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 PIGLQ9Y2B2 252 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 FREM2Q5SZK8 3169 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 A0A0U1RQV5 110 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 RNF222A6NCQ9 220 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 FCGR2AP12318 317 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 HLA-GP17693 338 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 DUSP3P51452 185 aaPredicted RBP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF84P51523 738 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 TRA2AQ13595 282 aaKnown RBP eCLIP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 RSPO4Q2I0M5 234 aaPredicted RBP15.55■□□□□ 0.08
LRCH3-201ENST00000334859 ARRDC1Q8N5I2 433 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 PIGTQ969N2 578 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 S100A13Q99584 98 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 PIGQQ9BRB3 760 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 ST6GALNAC5Q9BVH7 336 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 SRXN1Q9BYN0 137 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 SLC39A1Q9NY26 324 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 MBD2Q9UBB5 411 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 ANAPC10Q9UM13 185 aa15.55■□□□□ 0.08
LRCH3-201ENST00000334859 MYO7BQ6PIF6 2116 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 MUC3AQ02505 3323 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 LGALS8O00214 317 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 PRF1P14222 555 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 MLF1P58340 268 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 MC2RQ01718 297 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 ZFP36L1Q07352 338 aaKnown RBP15.54■□□□□ 0.08
LRCH3-201ENST00000334859 UBE2V2Q15819 145 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 VAX1Q5SQQ9 334 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 Q7L0L9 218 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 DTX1Q86Y01 620 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF837Q96EG3 531 aaPredicted RBP15.54■□□□□ 0.08
LRCH3-201ENST00000334859 ZNF75AQ96N20 296 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 SH2D2AQ9NP31 389 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 A0A0G2JMM0 328 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 A0A1W2PPB8 328 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 A0A1W2PRS3 328 aa15.54■□□□□ 0.08
LRCH3-201ENST00000334859 KIR3DP1A8MWS1 328 aa15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms