RNA–Protein interactions for RNA: ENST00000333371.7

VPS33B-201, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33B, Length 2,767 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-201ENST00000333371 RPH3AQ9Y2J0 694 aaPredicted RBP10.87□□□□□ -0.67
VPS33B-201ENST00000333371 MUC3AQ02505 3323 aa10.87□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF878C9JN71 531 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 PGA4P0DJD7 388 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 PGA3P0DJD8 388 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 AIMP2Q13155 320 aaKnown RBP10.86□□□□□ -0.67
VPS33B-201ENST00000333371 SHBQ15464 509 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 TMEM128Q5BJH2 165 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 C5orf46Q6UWT4 87 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 PGAP1Q75T13 922 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 UEVLDQ8IX04 471 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 BAP18Q8IXM2 172 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 PLPP5Q8NEB5 264 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 OR2AJ1Q8NGZ0 328 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 OR13G1Q8NGZ3 307 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 RTBDNQ9BSG5 229 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-201ENST00000333371 GSKIPQ9P0R6 139 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 SEMA5BQ9P283 1151 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 PURGQ9UJV8 347 aaKnown RBP10.86□□□□□ -0.67
VPS33B-201ENST00000333371 SRPK3Q9UPE1 567 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 B3GALT5Q9Y2C3 310 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 TEX13DA0A0J9YY54 714 aaPredicted RBP10.86□□□□□ -0.67
VPS33B-201ENST00000333371 FGF16O43320 207 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 WDPCPO95876 746 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 HEXBP07686 556 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 HOXB5P09067 269 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 CX3CR1P49238 355 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 PRSS12P56730 875 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 RAB32Q13637 225 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 GALNTL5Q7Z4T8 443 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 UBALD2Q8IYN6 164 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 PNLDC1Q8NA58 520 aaKnown RBP10.86□□□□□ -0.67
VPS33B-201ENST00000333371 NOXO1Q8NFA2 376 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 DUSP23Q9BVJ7 150 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 KLHL13Q9P2N7 655 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 FLVCR1Q9Y5Y0 555 aa10.86□□□□□ -0.67
VPS33B-201ENST00000333371 FRYQ5TBA9 3013 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 ARPC4-TTLL3A0A0A6YYG9 625 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 F8VVB4 439 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 F8VWA3 439 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 F8W036 122 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 TRAF3IP2O43734 574 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 OR2J2O76002 312 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF205O95201 554 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 QDPRP09417 244 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 TPT1P13693 172 aaKnown RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 RCC1P18754 421 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 P2RY4P51582 365 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF41P51814 821 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 BLOC1S1P78537 153 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 PLPPR5Q32ZL2 321 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 FAHD2BQ6P2I3 314 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF585AQ6P3V2 769 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF283Q8N7M2 679 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 FAHD2AQ96GK7 314 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 SLC6A15Q9H2J7 730 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 HRH4Q9H3N8 390 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 AKIRIN1Q9H9L7 192 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 ACKR4Q9NPB9 350 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 PNRC2Q9NPJ4 139 aaKnown RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 SHANK1Q9Y566 2161 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 AMY2BP19961 511 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 EPHA8P29322 1005 aaPredicted RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 PTGDSP41222 190 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 NPBWR1P48145 328 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 S100A10P60903 97 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 GABREP78334 506 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 MST1LQ2TV78 715 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 PRAMEF20Q5VT98 475 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 AADACL3Q5VUY0 350 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 GUSBP11Q6P575 273 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 MISPQ8IVT2 679 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 NMES1Q9C002 83 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 METTL8Q9H825 291 aaKnown RBP10.85□□□□□ -0.67
VPS33B-201ENST00000333371 METTL7AQ9H8H3 244 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 TREM1Q9NP99 234 aa10.85□□□□□ -0.67
VPS33B-201ENST00000333371 IGKV1D-8A0A087WSZ0 117 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 ZNF705EA8MWA4 302 aaPredicted RBP10.84□□□□□ -0.67
VPS33B-201ENST00000333371 SFT2D2O95562 160 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 KNG1P01042 644 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 IGHG1P01857 330 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 FAM157CP0CG43 387 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 SERPINA2P20848 420 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 ID4P47928 161 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 ACY1Q03154 408 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 THEM4Q5T1C6 240 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 LCN10Q6JVE6 187 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 CRIP3Q6Q6R5 217 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 CCDC36Q8IYA8 594 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 OR51T1Q8NGJ9 327 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 OR5H2Q8NGV7 314 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 OR6C1Q96RD1 312 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 WDR77Q9BQA1 342 aaPredicted RBP10.84□□□□□ -0.67
VPS33B-201ENST00000333371 FSCN3Q9NQT6 498 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 MFNGO00587 321 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 AGPAT2O15120 278 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 SIGLEC6O43699 453 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 CD79AP11912 226 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 NFYBP25208 207 aa10.84□□□□□ -0.67
VPS33B-201ENST00000333371 SNU13P55769 128 aaKnown RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms