RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 GPR1P46091 355 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 RAB28P51157 221 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 TLE4Q04727 773 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 ZNF266Q14584 549 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 ITPRIPL2Q3MIP1 535 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 LRRC73Q5JTD7 316 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 RTL6Q6ICC9 239 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 SLC18B1Q6NT16 456 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 TMEM184AQ6ZMB5 413 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 ZPLD1Q8TCW7 415 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 TMEM18Q96B42 140 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 NUS1Q96E22 293 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 SLC25A44Q96H78 314 aaPredicted RBP7.46□□□□□ -1.22
SKA2-201ENST00000330137 PYGO2Q9BRQ0 406 aa7.46□□□□□ -1.22
SKA2-201ENST00000330137 A0A087WV48 116 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 TGIF2-C20orf24A0A0A6YYL0 155 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 FAM171A2A8MVW0 826 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 C4orf51C9J302 202 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 CA11O75493 328 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 PNLIPP16233 465 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 G0S2P27469 103 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 GRPRP30550 384 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 RBMXP38159 391 aaKnown RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 GABRA4P48169 554 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 DNASE1L1P49184 302 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 GATMP50440 423 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 CLDN6P56747 220 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 RANP62826 216 aaKnown RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 NTHL1P78549 312 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 HSF1Q00613 529 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 ARL6IP1Q15041 203 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 IAH1Q2TAA2 248 aaPredicted RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 SLC35G3Q8N808 338 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 OR52N4Q8NGI2 321 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 OR6N2Q8NGY6 317 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 ROBO4Q8WZ75 1007 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 SERINC2Q96SA4 455 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 LMF2Q9BU23 707 aaKnown RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 KCNK15Q9H427 330 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 ELOVL3Q9HB03 270 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 TAS2R4Q9NYW5 299 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 B3GALT5Q9Y2C3 310 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 CEP290O15078 2479 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 OBSL1O75147 1896 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 WIPF3A6NGB9 483 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 HOXA2O43364 376 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 MBPP02686 304 aaPredicted RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 APOBEC1P41238 236 aaKnown RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 OR3A1P47881 315 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 SLC11A1P49279 550 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 NOVA1P51513 510 aaKnown RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 BPIFB3P59826 476 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 EIF3IQ13347 325 aaKnown RBP7.45□□□□□ -1.22
SKA2-201ENST00000330137 SLC9A3R2Q15599 337 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 TAF9Q16594 264 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 C21orf62-AS1Q17RA5 79 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 DEGS2Q6QHC5 323 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 SLC22A24Q8N4F4 322 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 JAGN1Q8N5M9 183 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 BHLHE23Q8NDY6 225 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 VN1R2Q8NFZ6 395 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 OR10A7Q8NGE5 316 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 HLA-CQ95604 372 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 COX14Q96I36 57 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 MRGPRX4Q96LA9 322 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 SYT3Q9BQG1 590 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 TM7SF3Q9NS93 570 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 GRHPRQ9UBQ7 328 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 SLC5A6Q9Y289 635 aa7.45□□□□□ -1.22
SKA2-201ENST00000330137 TRAV1-1A0A0B4J248 108 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 A0A1W2PPQ1 181 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 A6NIZ1 184 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 TMEM14DPA8MWL7 114 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 NSA2O95478 260 aaKnown RBP7.44□□□□□ -1.22
SKA2-201ENST00000330137 CST2P09228 141 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 ZNF10P21506 573 aaPredicted RBP7.44□□□□□ -1.22
SKA2-201ENST00000330137 PSMB5P28074 263 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 OR1D2P34982 312 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 PTGER1P34995 402 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 PAX5Q02548 391 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 ALG10Q5BKT4 473 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 DPY19L4Q7Z388 723 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 C2orf73Q8N5S3 287 aaPredicted RBP7.44□□□□□ -1.22
SKA2-201ENST00000330137 CSNK1A1LQ8N752 337 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 GVQW1Q8N7I0 195 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 LRTM2Q8N967 370 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 LINC01555Q8NAE3 123 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 AGBL5Q8NDL9 886 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 ADPRHL1Q8NDY3 354 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 OR5H2Q8NGV7 314 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 ULBP3Q9BZM4 244 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 SLC2A4RGQ9NR83 387 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 DECR2Q9NUI1 292 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 WSB2Q9NYS7 404 aaPredicted RBP7.44□□□□□ -1.22
SKA2-201ENST00000330137 CYP8B1Q9UNU6 501 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 C14orf166Q9Y224 244 aaKnown RBP7.44□□□□□ -1.22
SKA2-201ENST00000330137 A0A1B0GU03 582 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 FAM230AA0A1W2PPH8 454 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 ZNF727A8MUV8 499 aa7.44□□□□□ -1.22
SKA2-201ENST00000330137 SCAF4O95104 1147 aaKnown RBP7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms