RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 GPR34Q9UPC5 381 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 SLC7A11Q9UPY5 501 aa10.56□□□□□ -0.72
SHMT2-201ENST00000328923 COL4A3Q01955 1670 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF320A2RRD8 509 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 TLCD2A6NGC4 264 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 EIF1AYO14602 144 aaKnown RBP10.55□□□□□ -0.72
SHMT2-201ENST00000328923 LYL1P12980 280 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 SLC2A5P22732 501 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 OR10J1P30954 320 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 CAPZBP47756 277 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 EIF1AXP47813 144 aaKnown RBP10.55□□□□□ -0.72
SHMT2-201ENST00000328923 SOX2P48431 317 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 CX3CR1P49238 355 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 S100A10P60903 97 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 SLC35A1P78382 337 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 RAB32Q13637 225 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 SLC9A3R2Q15599 337 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 PRAMEF20Q5VT98 475 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 RPL22L1Q6P5R6 122 aaKnown RBP10.55□□□□□ -0.72
SHMT2-201ENST00000328923 LILRA6Q6PI73 481 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 Q6ZVL8 140 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF429Q86V71 674 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 NOXO1Q8NFA2 376 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 TMEM255BQ8WV15 326 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 IL23AQ9NPF7 189 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 FBXL17Q9UF56 701 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 RNF115Q9Y4L5 304 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 CLDN16Q9Y5I7 305 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 KIAA1549LQ6ZVL6 1849 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF736B4DX44 427 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-201ENST00000328923 DLL1O00548 723 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 NRG2O14511 850 aaPredicted RBP10.55□□□□□ -0.72
SHMT2-201ENST00000328923 TAAR5O14804 337 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 TMPRSS11DO60235 418 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 GPRIN2O60269 458 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 MAS1P04201 325 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 THY1P04216 161 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 IFNA6P05013 189 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 CKMP06732 381 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 OR5G3P0C626 314 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 CTHP32929 405 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 CD70P32970 193 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 VAMP2P63027 116 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 GAS6Q14393 721 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 MMDQ15546 238 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 LDLRAD2Q5SZI1 272 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 C1orf189Q5VU69 101 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 STT3BQ8TCJ2 826 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 SDSLQ96GA7 329 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 TECTBQ96PL2 329 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 MCHR1Q99705 422 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 AIF1LQ9BQI0 150 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 DPH1Q9BZG8 443 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 LUZP4Q9P127 313 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 SERGEFQ9UGK8 458 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 CYP8B1Q9UNU6 501 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 OSGIN2Q9Y236 505 aa10.55□□□□□ -0.72
SHMT2-201ENST00000328923 TSPAN11A1L157 253 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 RPP14O95059 124 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 DUS4LO95620 317 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 HMGN2P05204 90 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 C8AP07357 584 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 DANCRP0C864 163 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 CSRP1P21291 193 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 RPL4P36578 427 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 EFNA3P52797 238 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 FXYD6P3P58550 94 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 CYCSP99999 105 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 ID2Q02363 134 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 COA6Q5JTJ3 125 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 ADIPOR2Q86V24 386 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 AGBL5Q8NDL9 886 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 OR4C5Q8NGB2 326 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 CD180Q99467 661 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 OR11A1Q9GZK7 315 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 APOBEC3BQ9UH17 382 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 LSM7Q9UK45 103 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 PRUNE2Q8WUY3 3088 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 A0A1W2PRU2 124 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 FTCDNL1E5RQL4 147 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 F6UZH7 168 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 H3BSH0 61 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 P2RX6O15547 441 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 NDUFS4O43181 175 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 RCBTB2O95199 551 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 CYB5AP00167 134 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 PRH1P02810 166 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 CTSBP07858 339 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 CTXN2P0C2S0 81 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 NBEAP1P0C6P0 100 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 MMP16P51512 607 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 NCBP2P52298 156 aaKnown RBP eCLIP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 TGM3Q08188 693 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 LASP1Q14847 261 aaKnown RBP10.54□□□□□ -0.72
SHMT2-201ENST00000328923 SHHQ15465 462 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 LRRC73Q5JTD7 316 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 AGBL4Q5VU57 503 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 ZNF880Q6PDB4 577 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 LINC01551Q86U37 167 aa10.54□□□□□ -0.72
SHMT2-201ENST00000328923 OR51A2Q8NGJ7 313 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms