RNA–Protein interactions for RNA: ENST00000324288.12

CIITA-201, Transcript of class II major histocompatibility complex transactivator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CIITA, Length 11,952 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-201ENST00000324288 PPP1R1CQ8WVI7 109 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TIMD4Q96H15 378 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 SLC22A12Q96S37 553 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 OR2M5A3KFT3 312 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TAAR5O14804 337 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 RTL8BQ17RB0 113 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 PTCRAQ6ISU1 281 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 TMPRSS11FQ6ZWK6 438 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TSEN54Q7Z6J9 526 aaKnown RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 SLC16A11Q8NCK7 471 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ADGRL4Q9HBW9 690 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 MED17Q9NVC6 651 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 WDR1O75083 606 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 PTHLHP12272 177 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ICAM2P13598 275 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 MYBPHQ13203 477 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ZBTB37Q5TC79 503 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CXorf67Q86X51 503 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 SEH1LQ96EE3 360 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 C19orf43Q9BQ61 176 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TXNIPQ9H3M7 391 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CTSFQ9UBX1 484 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TMEM265A0A087WTH1 108 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 RAB29O14966 203 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CST2P09228 141 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 MDKP21741 143 aaPredicted RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 RNF113BQ8IZP6 322 aaKnown RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 ISG20Q96AZ6 181 aaKnown RBP7.17□□□□□ -1.26
CIITA-201ENST00000324288 SLC35A4Q96G79 324 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 BOD1Q96IK1 185 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 FAM210BQ96KR6 192 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 TAAR9Q96RI9 348 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 A0A1B0GUH1 482 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 M0R082 166 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 CBR3O75828 277 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 GYPAP02724 150 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 C17orf67Q0P5P2 114 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 OR10AD1Q8NGE0 317 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 OR1N1Q8NGS0 311 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 ONECUT1Q9UBC0 465 aa7.17□□□□□ -1.26
CIITA-201ENST00000324288 H3BP45 60 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 TBX19O60806 448 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 PPOXP50336 477 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 SUB1P53999 127 aaKnown RBP eCLIP7.16□□□□□ -1.26
CIITA-201ENST00000324288 LYPD8Q6UX82 237 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 H1FNTQ75WM6 255 aaPredicted RBP7.16□□□□□ -1.26
CIITA-201ENST00000324288 OR1L4Q8NGR5 311 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ROBO4Q8WZ75 1007 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 WASHC3Q9Y3C0 194 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 SERTM1A2A2V5 107 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 H0YIV9 168 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 TCL1AP56279 114 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ERVS71-1P61550 626 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 DUSP5Q16690 384 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 PGBD5Q8N414 524 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 FGF21Q9NSA1 209 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 PAM16Q9Y3D7 125 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 HCFC2Q9Y5Z7 792 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 B4GALT1P15291 398 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ZNF133P52736 654 aaPredicted RBP7.16□□□□□ -1.26
CIITA-201ENST00000324288 IHHQ14623 411 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 OR2AE1Q8NHA4 323 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 CSNK1G1Q9HCP0 422 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 MMP26Q9NRE1 261 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 TMEM129A0AVI4 362 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 CD3DP04234 171 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 WNT1P04628 370 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 CHRM2P08172 466 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 OR5H8P0DN80 308 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 EPHA2P29317 976 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ZNF816Q0VGE8 651 aaPredicted RBP7.16□□□□□ -1.26
CIITA-201ENST00000324288 Q6ZSR9 355 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 LYG2Q86SG7 212 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ADGRG7Q96K78 797 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 EDEM2Q9BV94 578 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 SLCO1C1Q9NYB5 712 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 GPANK1O95872 356 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 HEXAP06865 529 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 EMDP50402 254 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 GJC3Q8NFK1 279 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 CXCL16Q9H2A7 254 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 PLEKHF2Q9H8W4 249 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 NCBP2LA6PVI3 153 aaKnown RBP7.16□□□□□ -1.26
CIITA-201ENST00000324288 KIAA1324LA8MWY0 1029 aaPredicted RBP7.16□□□□□ -1.26
CIITA-201ENST00000324288 LIM2P55344 173 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ISL1P61371 349 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 LINC00303Q3SY05 128 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 BAP18Q8IXM2 172 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 RHOVQ96L33 236 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 ARG1P05089 322 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 SMIM17P0DL12 118 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 DEFB109BQ30KR1 87 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 OR4S1Q8NGB4 309 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 NXPE3Q969Y0 559 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 LSM2Q9Y333 95 aaKnown RBP7.16□□□□□ -1.26
CIITA-201ENST00000324288 NXNL2Q5VZ03 156 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 AFMIDQ63HM1 303 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 MISP3Q96FF7 219 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 S1PR3Q99500 378 aa7.16□□□□□ -1.26
CIITA-201ENST00000324288 SH2D7A6NKC9 451 aaPredicted RBP7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms