RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 MARCH11A6NNE9 402 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 LATO43561 262 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 RAD51DO75771 328 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 HEXBP07686 556 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 SRP19P09132 144 aaKnown RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 PI3P19957 117 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 PTGER4P35408 488 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 P2RY2P41231 377 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 CLDN6P56747 220 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 HNRNPA1L2Q32P51 320 aaKnown RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 ZNF615Q8N8J6 731 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 OR4C3Q8NH37 302 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 NKD1Q969G9 470 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 CYYR1Q96J86 154 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 SCGB3A2Q96PL1 93 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 NICN1Q9BSH3 213 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 ABHD6Q9BV23 337 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 VSX1Q9NZR4 365 aaPredicted RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 SRPK3Q9UPE1 567 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 KCNIP3Q9Y2W7 256 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 PUS1Q9Y606 427 aaKnown RBP eCLIP6.91□□□□□ -1.3
CD46-201ENST00000322875 C1QL1O75973 258 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 CSTAP01040 98 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 CHRM2P08172 466 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 SLC35G6P0C7Q6 338 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 OR5H8P0DN80 308 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 GLRA1P23415 457 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 CAMLGP49069 296 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 RND2P52198 227 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 NKX6-1P78426 367 aaPredicted RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 INSM1Q01101 510 aaPredicted RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 ZNF616Q08AN1 781 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 FOXF1Q12946 379 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 RAB35Q15286 201 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 OTPQ5XKR4 325 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 WBP2NLQ6ICG8 309 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 LILRA6Q6PI73 481 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 PRSS41Q7RTY9 318 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 CACUL1Q86Y37 369 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 ARL6IP6Q8N6S5 226 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 SUMF2Q8NBJ7 301 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 CHST4Q8NCG5 386 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 OR52N4Q8NGI2 321 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 OR13C9Q8NGT0 318 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 R3HDM4Q96D70 268 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 KTI12Q96EK9 354 aaPredicted RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 SUCNR1Q9BXA5 334 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 HDAC8Q9BY41 377 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 SH3BGRL3Q9H299 93 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 MBNL1Q9NR56 388 aaKnown RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 DECR2Q9NUI1 292 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 LRIT1Q9P2V4 623 aa6.91□□□□□ -1.3
CD46-201ENST00000322875 FOXD3Q9UJU5 478 aaPredicted RBP6.91□□□□□ -1.3
CD46-201ENST00000322875 FOXI3A8MTJ6 420 aaPredicted RBP6.9□□□□□ -1.3
CD46-201ENST00000322875 BGLAPP02818 100 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 SLC35E2P0CK97 266 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 RAB4AP20338 218 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 FGF7P21781 194 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 DNASE1L1P49184 302 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 TMEM50BP56557 158 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 HSF1Q00613 529 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 HNF4GQ14541 408 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 KIF26BQ2KJY2 2108 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 OR2T2Q6IF00 324 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 KCTD18Q6PI47 426 aaPredicted RBP6.9□□□□□ -1.3
CD46-201ENST00000322875 ZNF440Q8IYI8 595 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 TMEFF1Q8IYR6 380 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 SEMA6DQ8NFY4 1073 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 OR52N5Q8NH56 324 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 SNIP1Q8TAD8 396 aaKnown RBP6.9□□□□□ -1.3
CD46-201ENST00000322875 ZCCHC10Q8TBK6 192 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 METTL21AQ8WXB1 218 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 OR11A1Q9GZK7 315 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 CDH20Q9HBT6 801 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.9□□□□□ -1.33e-7■■■■■ 36.8
CD46-201ENST00000322875 TMEM242Q9NWH2 141 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 GSKIPQ9P0R6 139 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 INSL6Q9Y581 213 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 MPDZO75970 2070 aa6.9□□□□□ -1.3
CD46-201ENST00000322875 LOC101059948A0A1B0GTJ6 334 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 EDDM13A0A1B0GTR0 161 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 RBFOX3A6NFN3 312 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 GMFGO60234 142 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 CT45A8P0DMV1 189 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 CT45A9P0DMV2 189 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 FOLR1P15328 257 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 HIST1H1DP16402 221 aaKnown RBP6.9□□□□□ -1.31
CD46-201ENST00000322875 CCL20P78556 96 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 DLK1P80370 383 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 ELAVL3Q14576 367 aaKnown RBP6.9□□□□□ -1.31
CD46-201ENST00000322875 IAH1Q2TAA2 248 aaPredicted RBP6.9□□□□□ -1.31
CD46-201ENST00000322875 CT45A2Q5DJT8 189 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 COA6Q5JTJ3 125 aaKnown RBP6.9□□□□□ -1.31
CD46-201ENST00000322875 C1orf140Q5VVS0 124 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 GGNBP1Q5YKI7 109 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 DPPA2Q7Z7J5 298 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 CA13Q8N1Q1 262 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 SLC22A24Q8N4F4 322 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 OR5L2Q8NGL0 311 aa6.9□□□□□ -1.31
CD46-201ENST00000322875 EMG1Q92979 244 aaKnown RBP6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms