RNA–Protein interactions for RNA: ENST00000321897.9

VARS2-201, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best) BASIC

Gene VARS2, Length 4,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-201ENST00000321897 HFEQ30201 348 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 TRIM61Q5EBN2 209 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 SLC35D3Q5M8T2 416 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 FBXW12Q6X9E4 464 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 BEND4Q6ZU67 534 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 LYG2Q86SG7 212 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 OR9K2Q8NGE7 335 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 ZNRF4Q8WWF5 429 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 ZNF251Q9BRH9 671 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 HEXA-AS1Q9H8Q6 139 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 LMO7DNF2Z398 122 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 RER1O15258 196 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 ANGPTL7O43827 346 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 ERGP11308 486 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 GABREP78334 506 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 GLYATL2Q8WU03 294 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 KIRREL1Q96J84 757 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 MESP1Q9BRJ9 268 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 UBE2ZQ9H832 354 aaPredicted RBP13.66□□□□□ -0.22
VARS2-201ENST00000321897 H3BMH7 237 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 EIF3GO75821 320 aaKnown RBP eCLIP13.66□□□□□ -0.22
VARS2-201ENST00000321897 DCAF7P61962 342 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 MRPS34P82930 218 aaKnown RBP13.66□□□□□ -0.22
VARS2-201ENST00000321897 LPCAT3Q6P1A2 487 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 TMEM123Q8N131 208 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 SP7Q8TDD2 431 aaPredicted RBP13.66□□□□□ -0.22
VARS2-201ENST00000321897 MEGF10Q96KG7 1140 aa13.66□□□□□ -0.22
VARS2-201ENST00000321897 UBL7Q96S82 380 aaPredicted RBP13.66□□□□□ -0.22
VARS2-201ENST00000321897 IL11P20809 199 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 LAP3P28838 519 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 BTCP35070 178 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 MESTQ5EB52 335 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 RPL7L1Q6DKI1 246 aaKnown RBP13.65□□□□□ -0.22
VARS2-201ENST00000321897 C17orf78Q8N4C9 275 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 SCGB1C1Q8TD33 95 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 ASB17Q8WXJ9 295 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 CHST11Q9NPF2 352 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 RASL12Q9NYN1 266 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 GAB2Q9UQC2 676 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 SHANK1Q9Y566 2161 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 RAD51DO75771 328 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 CD96P40200 585 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 HTR5AP47898 357 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 HLA-CQ95604 372 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 OR5B12Q96R08 314 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 CLEC1BQ9P126 229 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 MMACHCQ9Y4U1 282 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 TSC2P49815 1807 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 RSPO4Q2I0M5 234 aaPredicted RBP13.65□□□□□ -0.22
VARS2-201ENST00000321897 TCEAL6Q6IPX3 200 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 C20orf196Q8IYI0 205 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 POM121Q96HA1 1249 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 MENTQ9BUN1 341 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 GAR1Q9NY12 217 aaKnown RBP13.65□□□□□ -0.22
VARS2-201ENST00000321897 KCNS2Q9ULS6 477 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 SLC7A11Q9UPY5 501 aa13.65□□□□□ -0.22
VARS2-201ENST00000321897 TMEM184BQ9Y519 407 aaPredicted RBP13.65□□□□□ -0.22
VARS2-201ENST00000321897 FABP4P15090 132 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 MIDNQ504T8 468 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 UBAC2Q8NBM4 344 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 NECAP1Q8NC96 275 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 GPR173Q9NS66 373 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 PI4KAP42356 2102 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 IGHV1OR15-9A0A0B4J2B8 117 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 ZFP92A6NM28 416 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 YIF1AO95070 293 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 FGF2P09038 288 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 CD37P11049 281 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 TCN2P20062 427 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 TAF9Q16594 264 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 OR2A2Q6IF42 318 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 LINC00469Q8N7U9 141 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 OTOSQ8NHW6 89 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 SLC25A28Q96A46 364 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 PHF7Q9BWX1 381 aaPredicted RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 A0A1W2PPE2 198 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 PIAS2O75928 621 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 SCGB1D1O95968 90 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 RPL12P30050 165 aaKnown RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 EIF2S3P41091 472 aaKnown RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 RAB32Q13637 225 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 ATPAF1Q5TC12 328 aaPredicted RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 ZNF100Q8IYN0 542 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 TDHQ8IZJ6 230 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 C11orf40Q8WZ69 217 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 ALKBH3Q96Q83 286 aaPredicted RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 RSPO3Q9BXY4 272 aaPredicted RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 ZMIZ1Q9ULJ6 1067 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 DICER1Q9UPY3 1922 aaKnown RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 IGHV1OR21-1A0A087WYE8 117 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 RPS15P62841 145 aaKnown RBP13.64□□□□□ -0.23
VARS2-201ENST00000321897 OGFOD3Q6PK18 319 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 OR52N5Q8NH56 324 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 SLC25A38Q96DW6 304 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 RAB33BQ9H082 229 aa13.64□□□□□ -0.23
VARS2-201ENST00000321897 PHF3Q92576 2039 aaKnown RBP13.63□□□□□ -0.23
VARS2-201ENST00000321897 A0A096LPE4 126 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 A0A1W2PPZ6 126 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 C5orf67F2Z3F1 127 aa13.63□□□□□ -0.23
VARS2-201ENST00000321897 CYB5BO43169 146 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms