RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 BLVRBP30043 206 aaPredicted RBP15.33■□□□□ 0.05
COL9A1-201ENST00000320755 SLC35A1P78382 337 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 KISS1Q15726 138 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 ASB13Q8WXK3 278 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 FBXW5Q969U6 566 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 RASL12Q9NYN1 266 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 SIT1Q9Y3P8 196 aa15.33■□□□□ 0.05
COL9A1-201ENST00000320755 DUS4LO95620 317 aaKnown RBP15.33■□□□□ 0.04
COL9A1-201ENST00000320755 IL2RAP01589 272 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 DOK3Q7L591 496 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 HOGA1Q86XE5 327 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 BHLHE23Q8NDY6 225 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 OR5H2Q8NGV7 314 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 RNF138Q8WVD3 245 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 ZNF837Q96EG3 531 aaPredicted RBP15.33■□□□□ 0.04
COL9A1-201ENST00000320755 SLC25A32Q9H2D1 315 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 MOB1AQ9H8S9 216 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 C12orf4Q9NQ89 552 aa15.33■□□□□ 0.04
COL9A1-201ENST00000320755 FCGR2AP12318 317 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 CSNK2A1P68400 391 aaPredicted RBP15.32■□□□□ 0.04
COL9A1-201ENST00000320755 OVCH2Q7RTZ1 564 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 FOXRED2Q8IWF2 684 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 TMEM156Q8N614 296 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 CSNK2A3Q8NEV1 391 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 SAP25Q8TEE9 199 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 LYZL4Q96KX0 146 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 OR10A2Q9H208 303 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 C5orf66Q9H5L9 145 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 GAREM1Q9H706 876 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 NPIPA2E9PIF3 369 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 NPIPA3F8WFD2 350 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 SCGNO76038 276 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 CCL4P13236 92 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 PSMB6P28072 239 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 HSD17B13Q7Z5P4 300 aaPredicted RBP15.32■□□□□ 0.04
COL9A1-201ENST00000320755 PNLDC1Q8NA58 520 aaKnown RBP15.32■□□□□ 0.04
COL9A1-201ENST00000320755 S100A13Q99584 98 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 URM1Q9BTM9 101 aaKnown RBP15.32■□□□□ 0.04
COL9A1-201ENST00000320755 ZNF701Q9NV72 531 aaPredicted RBP15.32■□□□□ 0.04
COL9A1-201ENST00000320755 GSKIPQ9P0R6 139 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 HDGFL3Q9Y3E1 203 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 IGLV3-32A0A0A0MS00 114 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 A0A0B4J2A0 478 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 KNG1P01042 644 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 SLC25A4P12235 298 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 GLRA1P23415 457 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 EIF1P41567 113 aaKnown RBP15.32■□□□□ 0.04
COL9A1-201ENST00000320755 CHAF1BQ13112 559 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 OR56B1Q8NGI3 324 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 OR14K1Q8NGZ2 314 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 ZC4H2Q9NQZ6 224 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 PLEK2Q9NYT0 353 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 SHPKQ9UHJ6 478 aa15.32■□□□□ 0.04
COL9A1-201ENST00000320755 SNU13P55769 128 aaKnown RBP15.31■□□□□ 0.04
COL9A1-201ENST00000320755 SNTB1Q13884 538 aaKnown RBP15.31■□□□□ 0.04
COL9A1-201ENST00000320755 PCOLCEQ15113 449 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 NKAPLQ5M9Q1 402 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 SLC25A43Q8WUT9 341 aaPredicted RBP15.31■□□□□ 0.04
COL9A1-201ENST00000320755 METTL8Q9H825 291 aaKnown RBP15.31■□□□□ 0.04
COL9A1-201ENST00000320755 EHFQ9NZC4 300 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 PIGLQ9Y2B2 252 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 GSTP1P09211 210 aaKnown RBP15.31■□□□□ 0.04
COL9A1-201ENST00000320755 PNLIPP16233 465 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 MSR1P21757 451 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 PTGFRP43088 359 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 UBE2V2Q15819 145 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 TMEM128Q5BJH2 165 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 MRPL14Q6P1L8 145 aaKnown RBP15.31■□□□□ 0.04
COL9A1-201ENST00000320755 CLEC18BQ6UXF7 455 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 HLA-CQ95604 372 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 ASF1BQ9NVP2 202 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 PISDQ9UG56 409 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 ADAMTS9Q9P2N4 1935 aa15.31■□□□□ 0.04
COL9A1-201ENST00000320755 CRHP06850 196 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 GABRR1P24046 479 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 GRB2P62993 217 aaKnown RBP15.3■□□□□ 0.04
COL9A1-201ENST00000320755 FADS6Q8N9I5 356 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 IFI44Q8TCB0 444 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 DKKL1Q9UK85 242 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 TNFSF11O14788 317 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 KLK3P07288 261 aaPredicted RBP15.3■□□□□ 0.04
COL9A1-201ENST00000320755 CNR1P21554 472 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 OR2AE1Q8NHA4 323 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 TMEM230Q96A57 120 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 ACKR4Q9NPB9 350 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 PATE3B3GLJ2 98 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 HOXB5P09067 269 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 ZNF345Q14585 488 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 HIST3H3Q16695 136 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 ADPRHL1Q8NDY3 354 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 GJC3Q8NFK1 279 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 BPIFCQ8NFQ6 507 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 OR2S2Q9NQN1 319 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 GPR132Q9UNW8 380 aa15.3■□□□□ 0.04
COL9A1-201ENST00000320755 A0A1B0GW55 424 aa15.29■□□□□ 0.04
COL9A1-201ENST00000320755 ZNF205O95201 554 aa15.29■□□□□ 0.04
COL9A1-201ENST00000320755 PATE4P0C8F1 98 aa15.29■□□□□ 0.04
COL9A1-201ENST00000320755 DUX4L2P0CJ85 424 aa15.29■□□□□ 0.04
COL9A1-201ENST00000320755 DUX4L3P0CJ86 424 aa15.29■□□□□ 0.04
COL9A1-201ENST00000320755 DUX4L4P0CJ87 422 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms