RNA–Protein interactions for RNA: ENST00000320280.8

SCAMP1-201, Transcript of secretory carrier membrane protein 1, humanhuman

TSL 3

Gene SCAMP1, Length 3,766 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP1-201ENST00000320280 EMC7Q9NPA0 242 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 UBAP1Q9NZ09 502 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 PURGQ9UJV8 347 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 IKZF2Q9UKS7 526 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CLEC4AQ9UMR7 237 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 POLR3KQ9Y2Y1 108 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ETV7Q9Y603 341 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 FAM183AA6NL82 134 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ANKRD65E5RJM6 399 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 H7C1C5 153 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ZG16O60844 167 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CTAG2O75638 210 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 IL1AP01583 271 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 TTRP02766 147 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OPN1LWP04000 364 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 GNAO1P09471 354 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 GIFP27352 417 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 POLR2IP36954 125 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ETV1P50549 477 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 IDH3GP51553 393 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LCN6P62502 163 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 FAM27E3Q08E93 113 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 IL13RA2Q14627 380 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 RAB39AQ14964 217 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SSX1Q16384 188 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 HIKESHIQ53FT3 197 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 FAM76BQ5HYJ3 339 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SHEQ5VZ18 495 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ELP2Q6IA86 826 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF774Q6NX45 483 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 AHSA2Q719I0 299 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LUZP2Q86TE4 346 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF573Q86YE8 665 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 MUC20Q8N307 709 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR8B12Q8NGG6 310 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 OR14K1Q8NGZ2 314 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 TMEM171Q8WVE6 324 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SPRYD4Q8WW59 207 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 YIPF6Q96EC8 236 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ELMOD3Q96FG2 381 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 TRMT61AQ96FX7 289 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 REEP6Q96HR9 211 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 PGLYRP3Q96LB9 341 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 MGLLQ99685 303 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 NOX3Q9HBY0 568 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF275Q9NSD4 429 aaPredicted RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 NPAP1Q9NZP6 1156 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 CCDC59Q9P031 241 aaKnown RBP2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 GNG8Q9UK08 70 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 COPS3Q9UNS2 423 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 SLC7A11Q9UPY5 501 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 USP24Q9UPU5 2620 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 AKAP13Q12802 2813 aa2.82□□□□□ -1.96
SCAMP1-201ENST00000320280 LOC100509620A0A075B734 347 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 DPRXA6NFQ7 191 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ANXA2P2A6NMY6 339 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 M0R1B8 84 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SERPINI2O75830 405 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GABARAPO95166 117 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CLPTM1O96005 669 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ATF1P18846 271 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 MYL9P24844 172 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 EDNRAP25101 427 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 MNDAP41218 407 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 NPY4RP50391 375 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 BSPH1Q075Z2 132 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CHD3Q12873 2000 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 IL24Q13007 206 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SNTB2Q13425 540 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 COL9A2Q14055 689 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 P2RY14Q15391 338 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 IGFBP7Q16270 282 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SRSF7Q16629 238 aaKnown RBP eCLIP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CEACAM21Q3KPI0 293 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TMEM155Q4W5P6 130 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ZNF554Q86TJ5 538 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 WDFY1Q8IWB7 410 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 MKXQ8IYA7 352 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 ZDHHC23Q8IYP9 409 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 OR11L1Q8NGX0 322 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 AP3S1Q92572 193 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 GTF3AQ92664 365 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 OPALINQ96PE5 141 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 METTL17Q9H7H0 456 aaPredicted RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 MED20Q9H944 212 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 CA10Q9NS85 328 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 MGAT4AQ9UM21 535 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SSR3Q9UNL2 185 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 DHDHQ9UQ10 334 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SF3B6Q9Y3B4 125 aaKnown RBP2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TRBV2A0A0J9YWF9 115 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 A0A1B0GTI1 187 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 C5orf49A4QMS7 147 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 TVP23AA6NH52 213 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 LRRC30A6NM36 301 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 M0R233 179 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 RER1O15258 196 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 MAGEB3O15480 346 aa2.81□□□□□ -1.96
SCAMP1-201ENST00000320280 SYT7O43581 403 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms