RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 TBC1D15Q8TC07 691 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 MAP6Q96JE9 813 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 DDOQ99489 341 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 TEX12Q9BXU0 123 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 SMURF1Q9HCE7 757 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 CMC2Q9NRP2 79 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 TNFRSF19Q9NS68 423 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 MRPL22Q9NWU5 206 aaKnown RBP11.76□□□□□ -0.53
RPP40-201ENST00000319533 MRPL15Q9P015 296 aaKnown RBP11.76□□□□□ -0.53
RPP40-201ENST00000319533 KAAG1Q9UBP8 84 aa11.76□□□□□ -0.53
RPP40-201ENST00000319533 TRAV38-1A0A0B4J264 116 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 OOEPA6NGQ2 149 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 M0R135 149 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 ADAM20O43506 726 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 GPR137BO60478 399 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 ECDO95905 644 aaPredicted RBP11.75□□□□□ -0.53
RPP40-201ENST00000319533 LHBP01229 141 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 SPI1P17947 270 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 PAICSP22234 425 aaKnown RBP11.75□□□□□ -0.53
RPP40-201ENST00000319533 FMO3P31513 532 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 ZNF92Q03936 586 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 DBPQ10586 325 aaPredicted RBP11.75□□□□□ -0.53
RPP40-201ENST00000319533 METTL11BQ5VVY1 283 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 SFRP4Q6FHJ7 346 aaPredicted RBP11.75□□□□□ -0.53
RPP40-201ENST00000319533 ZFP1Q6P2D0 407 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 MRPL21Q7Z2W9 205 aaKnown RBP11.75□□□□□ -0.53
RPP40-201ENST00000319533 TMEM179BQ7Z7N9 219 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 IQCF1Q8N6M8 205 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 SPERTQ8NA61 448 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 OR51L1Q8NGJ5 315 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 OR6K6Q8NGW6 343 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 LINC01006Q8NI28 216 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 DNAJC9Q8WXX5 260 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 SPTSSAQ969W0 71 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 OTULINQ96BN8 352 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 NRBF2Q96F24 287 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 ZNF799Q96GE5 643 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 PKP2Q99959 881 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 RBM4BQ9BQ04 359 aaKnown RBP11.75□□□□□ -0.53
RPP40-201ENST00000319533 ADAT1Q9BUB4 502 aaKnown RBP11.75□□□□□ -0.53
RPP40-201ENST00000319533 DCLRE1BQ9H816 532 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 RNF114Q9Y508 228 aa11.75□□□□□ -0.53
RPP40-201ENST00000319533 TVP23AA6NH52 213 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 HMGN1P05114 100 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 SPARCP09486 303 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 OSMP13725 252 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 ANOS1P23352 680 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 IER3P46695 156 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 SNAI3Q3KNW1 292 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 TEX36Q5VZQ5 186 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 HS3ST5Q8IZT8 346 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 GCSAMQ8N6F7 178 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 LRTOMTQ8WZ04 291 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 DMRTB1Q96MA1 342 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 NMNAT2Q9BZQ4 307 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 AP4S1Q9Y587 144 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 COMMD3-BMI1R4GMX3 469 aa11.74□□□□□ -0.53
RPP40-201ENST00000319533 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 IGHV4-59P01825 116 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 GYPBP06028 91 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 PRKACGP22612 351 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 ENTPD1P49961 510 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 GINS1Q14691 196 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 OR8B8Q15620 311 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 TAF9Q16594 264 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 DRAM2Q6UX65 266 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 BTN2A1Q7KYR7 527 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 FAM90A1Q86YD7 464 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 PQLC1Q8N2U9 271 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 ZSCAN4Q8NAM6 433 aaPredicted RBP11.73□□□□□ -0.53
RPP40-201ENST00000319533 NRG4Q8WWG1 115 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 LHX4Q969G2 390 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 RASSF4Q9H2L5 321 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 C16orf95Q9H693 158 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 PAPOLBQ9NRJ5 636 aaKnown RBP11.73□□□□□ -0.53
RPP40-201ENST00000319533 C1orf123Q9NWV4 160 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 KPTNQ9Y664 436 aa11.73□□□□□ -0.53
RPP40-201ENST00000319533 A0A0U1RQK1 487 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 GGT3PA6NGU5 568 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 DVL1O14640 695 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 BAG2O95816 211 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 GYPAP02724 150 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 CLUP10909 449 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 FCGR1AP12314 374 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 FASP25445 335 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 RPS27P42677 84 aaKnown RBP11.72□□□□□ -0.53
RPP40-201ENST00000319533 ARF6P62330 175 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 MZT1Q08AG7 82 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 TAF13Q15543 124 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 PCK2Q16822 640 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 CDONQ4KMG0 1287 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 GLYATL3Q5SZD4 288 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 METAP1DQ6UB28 335 aaPredicted RBP11.72□□□□□ -0.53
RPP40-201ENST00000319533 ZNF826PQ6ZT77 177 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 DCXRQ7Z4W1 244 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 AMIGO2Q86SJ2 522 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 BOLLQ8N9W6 283 aaKnown RBP11.72□□□□□ -0.53
RPP40-201ENST00000319533 LY6G5BQ8NDX9 201 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 OR2AE1Q8NHA4 323 aa11.72□□□□□ -0.53
RPP40-201ENST00000319533 OR5K1Q8NHB7 308 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms