RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 PAX7P23759 505 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 LOXP28300 417 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 TTKP33981 857 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 SERPINB10P48595 397 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 KLF3P57682 345 aaPredicted RBP13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 OR10A3P58181 314 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 RIPPLY1Q0D2K3 151 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 SPCS2Q15005 226 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 OR8B8Q15620 311 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 ADIPOQQ15848 244 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 TIMM50Q3ZCQ8 353 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 CD200R1LQ6Q8B3 271 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 FBXW12Q6X9E4 464 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 RNF144BQ7Z419 303 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 FAM222BQ8WU58 562 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 PIGTQ969N2 578 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 RFT1Q96AA3 541 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 CMAHPQ9Y471 501 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 A6NNC1 897 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 H0YL77 283 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 PLATP00750 562 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 NAT2P11245 290 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 SDC2P34741 201 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 TRAM1Q15629 374 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 UBE2V2Q15819 145 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 NKPD1Q17RQ9 610 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 SERPINA12Q8IW75 414 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 NUP37Q8NFH4 326 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 KCTD7Q96MP8 289 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 PLK3Q9H4B4 646 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 UBTD1Q9HAC8 227 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 TCF7L1Q9HCS4 588 aa13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 RSL24D1Q9UHA3 163 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 PURGQ9UJV8 347 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 AK6Q9Y3D8 172 aaKnown RBP13.18□□□□□ -0.3
PDLIM5-202ENST00000318007 CLEC18AA5D8T8 446 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 CDRT1O95170 752 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 CD1AP06126 327 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 SRMP19623 302 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 CFL1P23528 166 aaKnown RBP13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 MAPK3P27361 379 aaPredicted RBP13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 PLCXD3Q63HM9 321 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 CLEC18BQ6UXF7 455 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 MOB3CQ70IA8 216 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 CLEC18CQ8NCF0 446 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 OR5D18Q8NGL1 313 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 RAB2BQ8WUD1 216 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 SLC30A2Q9BRI3 323 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 SNTG1Q9NSN8 517 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 TAAR3PQ9P1P4 343 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 CKLFQ9UBR5 152 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 GSTK1Q9Y2Q3 226 aa13.17□□□□□ -0.3
PDLIM5-202ENST00000318007 FAM230AA0A1W2PPH8 454 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 ANKRD30BLA7E2S9 258 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 GMDSO60547 372 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 UCHL1P09936 223 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 COX6B1P14854 86 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 RAC2P15153 192 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 CD53P19397 219 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 MYL9P24844 172 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 PEX19P40855 299 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 RPS23P62266 143 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 PRDX4Q13162 271 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 ZNF672Q499Z4 452 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 TMEM200AQ86VY9 491 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 BATF2Q8N1L9 274 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 MRPL24Q96A35 216 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 HAVCR1Q96D42 359 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 ZNF391Q9UJN7 358 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 AKAP6Q13023 2319 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 IGKV1-9A0A0C4DH69 117 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 ZNF816-ZNF321PA0A0X1KG74 233 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 J3QW42 95 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 SPRY3O43610 288 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 GATBO75879 557 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 ARL6IP5O75915 188 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 NRASP01111 189 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 HCKP08631 526 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 SERPINF1P36955 418 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 PPP3R1P63098 170 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 MBNL2Q5VZF2 373 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 OR5D14Q8NGL3 314 aa13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 ADAT1Q9BUB4 502 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 CGGBP1Q9UFW8 167 aaPredicted RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 ASH1LQ9NR48 2969 aaKnown RBP13.16□□□□□ -0.3
PDLIM5-202ENST00000318007 TRBV5-7A0A0A0MS05 114 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 PLSCR5A0PG75 271 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 A6NHS1 94 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 ZNF250P15622 560 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 ZNF12P17014 697 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 FGF9P31371 208 aaPredicted RBP13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 GPM6AP51674 278 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 TMBIM6P55061 237 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 C1QTNF12Q5T7M4 302 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 UNQ9370/PRO34162Q6UXP9 181 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 Q6ZR03 302 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 NR2C2APQ86WQ0 139 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 PARP16Q8N5Y8 322 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 OR2Z1Q8NG97 314 aa13.15□□□□□ -0.3
PDLIM5-202ENST00000318007 OR52N4Q8NGI2 321 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms