RNA–Protein interactions for RNA: ENST00000317968.8

PDLIM5-201, Transcript of PDZ and LIM domain 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDLIM5, Length 6,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-201ENST00000317968 PRKACAP17612 351 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 THBS4P35443 961 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 GPR6P46095 362 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 TMEM251Q8N6I4 163 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 WDSUB1Q8N9V3 476 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ZFP62Q8NB50 900 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC26A10Q8NG04 563 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 OR2Z1Q8NG97 314 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 BORCS7Q96B45 105 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF416Q9BWM5 594 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 LINC00470Q9BZP3 86 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 GAL3ST2Q9H3Q3 398 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 LSM2Q9Y333 95 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 A0A0J9YW62 118 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF816-ZNF321PA0A0X1KG74 233 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 LOC107986453A0A1B0GWG9 222 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 HTR2CP28335 458 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 SRPXP78539 464 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 EGR4Q05215 589 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 C10orf128Q5T292 105 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 C1QL3Q5VWW1 255 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 CNIH2Q6PI25 160 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 OR1F12Q8NHA8 337 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 CXXC4Q9H2H0 198 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 RIMS4Q9H426 269 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 GNB4Q9HAV0 340 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 AK6Q9Y3D8 172 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 LOC100509620A0A075B734 347 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 NCR1O76036 304 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 EDN3P14138 238 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 B4GALT1P15291 398 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 RPS2P15880 293 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 LTC4SQ16873 150 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 PCGF3Q3KNV8 242 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 FAM27BQ5VT28 67 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 LINC00346Q8IVM7 164 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 FBXW5Q969U6 566 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 TSSK2Q96PF2 358 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF471Q9BX82 626 aaPredicted RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 TMEM59Q9BXS4 323 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 RHBDL2Q9NX52 303 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 ETAA1Q9NY74 926 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 GSKIPQ9P0R6 139 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 RAB22AQ9UL26 194 aa7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 PCDHGA9Q9Y5G4 932 aaKnown RBP7.58□□□□□ -1.2
PDLIM5-201ENST00000317968 J3QW42 95 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 SPINK2P20155 84 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 HOXA1P49639 335 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 ZNF85Q03923 595 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 KCNMB1Q16558 191 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 DEFB108BQ8NET1 73 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 PIGTQ969N2 578 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 SPSB1Q96BD6 273 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 MED30Q96HR3 178 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 OR14A2Q96R54 314 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 PTDSS2Q9BVG9 487 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 ST6GALNAC5Q9BVH7 336 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 MS4A7Q9GZW8 240 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 LIN7BQ9HAP6 207 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 J3QRK9 145 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CT45A6P0DMU7 189 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CT45A5P0DMU8 189 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CT45A7P0DMV0 189 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 RPS19P39019 145 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 RAB11AP62491 216 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 RPL23AP62750 156 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CT45A1Q5HYN5 189 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC16A12Q6ZSM3 486 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 LRRC75AQ8NAA5 344 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CT45A3Q8NHU0 189 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 FOXN4Q96NZ1 517 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 ADAT1Q9BUB4 502 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 SHARPINQ9H0F6 387 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 ZCCHC4Q9H5U6 513 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 HEXA-AS1Q9H8Q6 139 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 FAM186AA6NE01 2351 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 HAX1O00165 279 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 TRAF3IP2O43734 574 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 NTN1O95631 604 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 IFNA17P01571 189 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 APEX1P27695 318 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 SHC1P29353 583 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CRYBB2P43320 205 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 FABP5Q01469 135 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 LCN10Q6JVE6 187 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 SLC25A47Q6Q0C1 308 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CD200R1LQ6Q8B3 271 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 RNF138Q8WVD3 245 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CEBPZOSA8MTT3 80 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 PRAF2O60831 178 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 COX5BP10606 129 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 FXYD4P59646 89 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 EFNB1P98172 346 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 LILRB2Q8N423 598 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 ZBTB8BQ8NAP8 495 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 MRPS24Q96EL2 167 aaKnown RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 KIRREL1Q96J84 757 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 UQCC2Q9BRT2 126 aa7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 AKIRIN1Q9H9L7 192 aaPredicted RBP7.57□□□□□ -1.2
PDLIM5-201ENST00000317968 CGGBP1Q9UFW8 167 aaPredicted RBP7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms