RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 ZNF225Q9UK10 706 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 KLK4Q9Y5K2 254 aa12.07□□□□□ -0.48
RFFL-201ENST00000315249 GP1BAP07359 652 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 CELA2AP08217 269 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 DDOSTP39656 456 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 SCGB2A2Q13296 93 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 CHD5Q8TDI0 1954 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 MEIOCA2RUB1 952 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 THBS3P49746 956 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 ZNF816Q0VGE8 651 aaPredicted RBP12.06□□□□□ -0.48
RFFL-201ENST00000315249 OR56B4Q8NH76 319 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 SAP25Q8TEE9 199 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 TMEM230Q96A57 120 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 ORAI1Q96D31 301 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 CNTNAP3BQ96NU0 1288 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 PSME4Q14997 1843 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 OR10J4P0C629 311 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 C2orf76Q3KRA6 126 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 STUMQ69YW2 141 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 OR51S1Q8NGJ8 323 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 C20orf141Q9NUB4 165 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 PRR19A6NJB7 356 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 IGHV3-13P01766 116 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 IGHV3-7P01780 117 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 ZNF529Q6P280 563 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 LGI3Q8N145 548 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 ADPRHL1Q8NDY3 354 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 AMDHD2Q9Y303 409 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 C16orf97H3BN30 126 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 TESK1Q15569 626 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 SSX2Q16385 188 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 SLC23A3Q6PIS1 610 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 SUMF2Q8NBJ7 301 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 ARHGDIGQ99819 225 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 JAM3Q9BX67 310 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 WDR54Q9H977 334 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 CEPT1Q9Y6K0 416 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 ADAM20O43506 726 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 MGST1P10620 155 aaKnown RBP12.06□□□□□ -0.48
RFFL-201ENST00000315249 PSMB1P20618 241 aaKnown RBP12.06□□□□□ -0.48
RFFL-201ENST00000315249 PRDX4Q13162 271 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 FAM213BQ8TBF2 198 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 SMIM19Q96E16 107 aa12.06□□□□□ -0.48
RFFL-201ENST00000315249 PLPP3O14495 311 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 TGM1P22735 817 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 OR6K3Q8NGY3 331 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 SEH1LQ96EE3 360 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 METTL17Q9H7H0 456 aaPredicted RBP12.05□□□□□ -0.48
RFFL-201ENST00000315249 ACACAQ13085 2346 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 ATF1P18846 271 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 SSTR2P30874 369 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 FCGR2CP31995 323 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 CDC20Q12834 499 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 SPANXN5Q5MJ07 72 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 ASB5Q8WWX0 329 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 FLVCR1Q9Y5Y0 555 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 TMEM129A0AVI4 362 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 DEFB108AA8MXU0 73 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 ZNF26P17031 533 aaPredicted RBP12.05□□□□□ -0.48
RFFL-201ENST00000315249 HTR2BP41595 481 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 LSAMPQ13449 338 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 SAP30LQ9HAJ7 183 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 SIAEQ9HAT2 523 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 ARPC3O15145 178 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 MGMTP16455 207 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 DTYMKP23919 212 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 RAP2BP61225 183 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 FUT7Q11130 342 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 ATP1A1-AS1Q5TC04 95 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 EDARADDQ8WWZ3 215 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 CHST6Q9GZX3 395 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 IMPA2O14732 288 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 OR5G3P0C626 314 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 LIPAP38571 399 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 LRRC29Q8WV35 223 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 UHRF2Q96PU4 802 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 DOK1Q99704 481 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 ARID2Q68CP9 1835 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 POLEQ07864 2286 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 A0A0B4J203 849 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 DVL1O14640 695 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 CD96P40200 585 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 ZFP36L2P47974 494 aaKnown RBP12.05□□□□□ -0.48
RFFL-201ENST00000315249 DVL1P1P54792 670 aaPredicted RBP12.05□□□□□ -0.48
RFFL-201ENST00000315249 NANPQ8TBE9 248 aa12.05□□□□□ -0.48
RFFL-201ENST00000315249 COL6A6A6NMZ7 2263 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 SDK2Q58EX2 2172 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 NTN1O95631 604 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 PEBP1P30086 187 aaKnown RBP12.04□□□□□ -0.48
RFFL-201ENST00000315249 ZNF501Q96CX3 271 aaPredicted RBP12.04□□□□□ -0.48
RFFL-201ENST00000315249 MPZL1O95297 269 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 SLC7A6Q92536 515 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 TTTY12Q9BZ98 90 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 RNF167Q9H6Y7 350 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 RIF1Q5UIP0 2472 aaKnown RBP12.04□□□□□ -0.48
RFFL-201ENST00000315249 OTOSQ8NHW6 89 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 RFESDQ8TAC1 157 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 NMES1Q9C002 83 aa12.04□□□□□ -0.48
RFFL-201ENST00000315249 TMEM30CPA0ZSE6 113 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms