RNA–Protein interactions for RNA: ENST00000310441.11

HCFC1-201, Transcript of host cell factor C1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HCFC1, Length 8,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-201ENST00000310441 M0R082 166 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 RGS13O14921 159 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 DIO1P49895 249 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 SLC36A1Q7Z2H8 476 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 NIPSNAP1Q9BPW8 284 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 IFT22Q9H7X7 185 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 CRYBA1P05813 215 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 PSMB2P49721 201 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 LINC00696Q6ZRV3 163 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 RPS19BP1Q86WX3 136 aaKnown RBP14.04□□□□□ -0.16
HCFC1-201ENST00000310441 FYTTD1Q96QD9 318 aaKnown RBP14.04□□□□□ -0.16
HCFC1-201ENST00000310441 SLC25A19Q9HC21 320 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 A0A1B0GVG6 124 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 CORO6Q6QEF8 472 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.04□□□□□ -0.16
HCFC1-201ENST00000310441 MRPL22Q9NWU5 206 aaKnown RBP14.04□□□□□ -0.16
HCFC1-201ENST00000310441 SCAND1P57086 179 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 ETFDHQ16134 617 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 LIPNQ5VXI9 398 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 RXFP4Q8TDU9 374 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 ADGRG7Q96K78 797 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 ZIC5Q96T25 663 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 C19orf43Q9BQ61 176 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 FAM117AQ9C073 453 aa14.04□□□□□ -0.16
HCFC1-201ENST00000310441 ZNF429Q86V71 674 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 TMEM229BQ8NBD8 167 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 LIPAP38571 399 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 RHOBP62745 196 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 OR1L4Q8NGR5 311 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 MAP6Q96JE9 813 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 RNF2Q99496 336 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 PIAS2O75928 621 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 CD81P60033 236 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 CLDN23Q96B33 292 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 SLC10A3P09131 477 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 SMIM4Q8WVI0 70 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 CCL11P51671 97 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 SHBQ15464 509 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 MORN1Q5T089 497 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 ARRDC3Q96B67 414 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 TOX2Q96NM4 488 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 PARP12Q9H0J9 701 aaKnown RBP14.03□□□□□ -0.16
HCFC1-201ENST00000310441 ADGRL4Q9HBW9 690 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 ALPK2Q86TB3 2170 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 FAM71E1Q6IPT2 247 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 CADM3Q8N126 398 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 TAAR9Q96RI9 348 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 NAT8BQ9UHF3 227 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 TRIOBPQ9H2D6 2365 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 OPN1MWP04001 364 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 OPN1MW2P0DN77 364 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 OPN1MW3P0DN78 364 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 MMP11P24347 488 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 PFN3P60673 137 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 MAP1LC3CQ9BXW4 147 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 GPR173Q9NS66 373 aa14.03□□□□□ -0.16
HCFC1-201ENST00000310441 OR3A1P47881 315 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 FAM78AQ5JUQ0 283 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 Q96M85 177 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 PLXNB2O15031 1838 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 PATJQ8NI35 1801 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 DLEC1Q9Y238 1755 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 SP1P08047 785 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 CD27P26842 260 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 GJA4P35212 333 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 ZDHHC16Q969W1 377 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 AP5S1Q9NUS5 200 aa14.02□□□□□ -0.16
HCFC1-201ENST00000310441 ZNF865P0CJ78 1059 aaPredicted RBP14.02□□□□□ -0.17
HCFC1-201ENST00000310441 FFAR4Q5NUL3 377 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 KMT5CQ86Y97 462 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 OR51E1Q8TCB6 317 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 OR2T8A6NH00 312 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 BCORP1Q8N888 145 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 CMBLQ96DG6 245 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 NAA50Q9GZZ1 169 aaKnown RBP14.02□□□□□ -0.17
HCFC1-201ENST00000310441 HAAOP46952 286 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 PBOV1Q9GZY1 135 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF66Q6ZN08 573 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF740Q8NDX6 193 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 PRSS3P2Q8NHM4 247 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 RTN4IP1Q8WWV3 396 aaPredicted RBP14.02□□□□□ -0.17
HCFC1-201ENST00000310441 SLC46A2Q9BY10 475 aa14.02□□□□□ -0.17
HCFC1-201ENST00000310441 ZAR1LA6NP61 321 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 BTG2P78543 158 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 DPTQ07507 201 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ZNF385BQ569K4 471 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 RNASEKQ6P5S7 137 aaKnown RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 OR5AS1Q8N127 324 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ARFGAP1Q8N6T3 406 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 OR52N4Q8NGI2 321 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 PLXNA1Q9UIW2 1896 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ELOA3CA0A087WX78 387 aaPredicted RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 SIRPB1O00241 398 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 HMGN4O00479 90 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 CST4P01036 141 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 OR5AL1P0C617 328 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 HTR1DP28221 377 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 ARRB2P32121 409 aa14.01□□□□□ -0.17
HCFC1-201ENST00000310441 RNPS1Q15287 305 aaKnown RBP14.01□□□□□ -0.17
HCFC1-201ENST00000310441 SPSB1Q96BD6 273 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 88.5 ms