RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 IGHV4-39P01824 125 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 CD1AP06126 327 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 KIR3DL2P43630 455 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 ART1P52961 327 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 NANOS3P60323 173 aaKnown RBP15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 MVKQ03426 396 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 IRF3Q14653 427 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 OR8G1Q15617 311 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 TBCEQ15813 527 aaPredicted RBP15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 KCTD21Q4G0X4 260 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 GATAD2BQ8WXI9 593 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 ADAT1Q9BUB4 502 aaKnown RBP15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 TPK1Q9H3S4 243 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 ERVK-18Q9QC07 812 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 PDZD2O15018 2839 aa15.23■□□□□ 0.03
SSSCA1-201ENST00000309328 OGG1O15527 345 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 GATBO75879 557 aaKnown RBP15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 SERPINA3P01011 423 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 DAOP14920 347 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 CA6P23280 308 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 ANOS1P23352 680 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 CD200P41217 278 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 CCL8P80075 99 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 SLC3A1Q07837 685 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 GPR50Q13585 617 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 SPHARQ15513 63 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 CLEC2AQ6UVW9 174 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 Q6ZR03 302 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 OR8S1Q8NH09 359 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 UBASH3BQ8TF42 649 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 PP6455Q8WZ26 134 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 RDH5Q92781 318 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 HIST1H2AAQ96QV6 131 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 MICU1Q9BPX6 476 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 ISYNA1Q9NPH2 558 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 PIGLQ9Y2B2 252 aa15.22■□□□□ 0.03
SSSCA1-201ENST00000309328 ZFPL1O95159 310 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 TNFAIP8O95379 198 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 MT-ND2P03891 347 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 ACKR3P25106 362 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 CRYBB2P43320 205 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 GATA4P43694 442 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 YIF1BQ5BJH7 314 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 Q5PR19 223 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 CLVS2Q5SYC1 327 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 DMKNQ6E0U4 476 aaPredicted RBP15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 ZDHHC23Q8IYP9 409 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 ZCCHC24Q8N2G6 241 aaKnown RBP15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 OR14K1Q8NGZ2 314 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 FCGR1BQ92637 280 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 OR2V2Q96R30 315 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 NEK6Q9HC98 313 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 ZNF281Q9Y2X9 895 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 RHBDD3Q9Y3P4 386 aa15.21■□□□□ 0.03
SSSCA1-201ENST00000309328 USF3Q68DE3 2245 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 CCDC168Q8NDH2 2452 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 ARFGEF3Q5TH69 2177 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 TMEM210A6NLX4 147 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 E9PI62 339 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 MLNRO43193 412 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 PLPP2O43688 288 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 PTBP3O95758 552 aaKnown RBP15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 CD2P06729 351 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 MAGEB1P43366 347 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 PDLIM4P50479 330 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 CHN2P52757 468 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 TMEM33P57088 247 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 TNK1Q13470 666 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 MED22Q15528 200 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 TSTQ16762 297 aaKnown RBP15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 ODF4Q2M2E3 257 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 HFEQ30201 348 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 TMEM42Q69YG0 159 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF367Q7RTV3 350 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 OR10AD1Q8NGE0 317 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 GPR148Q8TDV2 347 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 HPS1Q92902 700 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 PPP1R14AQ96A00 147 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 RTL8AQ9BWD3 113 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 CHODLQ9H9P2 273 aa15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 LSM2Q9Y333 95 aaKnown RBP15.2■□□□□ 0.02
SSSCA1-201ENST00000309328 IGHV1-69-2A0A0G2JMI3 117 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 TRIM64A6NGJ6 449 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 OR5B21A6NL26 309 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 LRRC30A6NM36 301 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 SSX4O60224 188 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 LILRA1O75019 489 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 NRASP01111 189 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF20P17024 532 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 GTF2A1P52655 376 aaPredicted RBP15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 PRDX4Q13162 271 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF181Q2M3W8 571 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 CEACAM21Q3KPI0 293 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 ZNF773Q6PK81 442 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 MS4A15Q8N5U1 240 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 OR13C3Q8NGS6 347 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 FAM168AQ92567 244 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 GTF3AQ92664 365 aaKnown RBP15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 MEGF10Q96KG7 1140 aa15.19■□□□□ 0.02
SSSCA1-201ENST00000309328 PDCD1LG2Q9BQ51 273 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms