RNA–Protein interactions for RNA: ENST00000308521.9

APOBEC3F-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC3F, Length 2,694 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3F-201ENST00000308521 TMEM225Q6GV28 225 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ASPHD2Q6ICH7 369 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 FAHD2BQ6P2I3 314 aaPredicted RBP9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 DHRS13Q6UX07 377 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 DPPA2Q7Z7J5 298 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZDHHC22Q8N966 263 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF563Q8TA94 476 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 PPP1R1CQ8WVI7 109 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 SLAMF9Q96A28 289 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 FAHD2AQ96GK7 314 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 TBL1XR1Q9BZK7 514 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 ELOVL3Q9HB03 270 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 TMEM100Q9NV29 134 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 UQCC1Q9NVA1 299 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 LOXL2Q9Y4K0 774 aa9.17□□□□□ -0.94
APOBEC3F-201ENST00000308521 KLF7O75840 302 aaPredicted RBP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 CD79AP11912 226 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 TACR3P29371 465 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 DDTP30046 118 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 INSM1Q01101 510 aaPredicted RBP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 RPL18Q07020 188 aaKnown RBP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 TRA2AQ13595 282 aaKnown RBP eCLIP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 SSPNQ14714 243 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 FNDC7Q5VTL7 733 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF627Q7L945 461 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF441Q8N8Z8 693 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 MITD1Q8WV92 249 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 LOXL4Q96JB6 756 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 PRRT1Q99946 306 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 MRPL37Q9BZE1 423 aaKnown RBP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 PARPBPQ9NWS1 579 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 DHDHQ9UQ10 334 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 KCNIP3Q9Y2W7 256 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 A0A1W2PNU3 283 aaPredicted RBP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 MEGF11A6BM72 1044 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 BTBD17A6NE02 478 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 HLA-AP01891 365 aaKnown RBP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 F13BP05160 661 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 UMODP07911 640 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 FBXO45P0C2W1 286 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF883P0CG24 379 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 S100A2P29034 98 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 CRABP1P29762 137 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ATP1B3P54709 279 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 NAAAQ02083 359 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 EGR4Q05215 589 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 PMPCAQ10713 525 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 COTL1Q14019 142 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ODF4Q2M2E3 257 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ETV3LQ6ZN32 361 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ADGRE4PQ86SQ3 457 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 ZNF679Q8IYX0 411 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 INO80EQ8NBZ0 244 aaPredicted RBP9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 AMELYQ99218 206 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 SLC6A7Q99884 636 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 CKLFQ9UBR5 152 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 VSIG4Q9Y279 399 aa9.16□□□□□ -0.94
APOBEC3F-201ENST00000308521 F5H0A9 414 aaPredicted RBP9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 MKRN2OSH3BPM6 223 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 H7C1C5 153 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 EIF1AYO14602 144 aaKnown RBP9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR2J2O76002 312 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 STK17BO94768 372 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 HOXB5P09067 269 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 HOXA5P20719 270 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 GLP1RP43220 463 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 EIF1AXP47813 144 aaKnown RBP9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 PRKXP51817 358 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 PNLIPRP2P54317 469 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 SLC26A5P58743 744 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 DCAF7P61962 342 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 NUTF2P61970 127 aaKnown RBP9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 LCN6P62502 163 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 ROM1Q03395 351 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 TIPARPQ7Z3E1 657 aaKnown RBP9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR5AP2Q8NGF4 316 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 SVIPQ8NHG7 77 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 PRDM13Q9H4Q3 707 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 SEC61A2Q9H9S3 476 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 ASF1BQ9NVP2 202 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 RCC2Q9P258 522 aaKnown RBP9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 KCNG2Q9UJ96 466 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 POMT1Q9Y6A1 747 aa9.15□□□□□ -0.94
APOBEC3F-201ENST00000308521 OR2AT4A6NND4 320 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 PTBP3O95758 552 aaKnown RBP9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 JMJD7P0C870 316 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 RAB6AP20340 208 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 MAS1LP35410 378 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 CDX1P47902 265 aaPredicted RBP9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 MEP1BQ16820 701 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 PNLIPRP3Q17RR3 467 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 C1orf100Q5SVJ3 147 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 DCAF12Q5T6F0 453 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 C1QL3Q5VWW1 255 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 RAB12Q6IQ22 244 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 LRRC69Q6ZNQ3 347 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 ZNF584Q8IVC4 421 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 SUMF1Q8NBK3 374 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 PLPP7Q8NBV4 271 aa9.15□□□□□ -0.95
APOBEC3F-201ENST00000308521 SLC30A7Q8NEW0 376 aa9.15□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms