RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 OR5AL1P0C617 328 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 HLA-BQ31612 363 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 OR2Z1Q8NG97 314 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 DYRK2Q92630 601 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 WNT2BQ93097 391 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 ADIPOR1Q96A54 375 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 FAAP24Q9BTP7 215 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 WASHC3Q9Y3C0 194 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 UFC1Q9Y3C8 167 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 TCRBV5S2A0A599 114 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 M0R135 149 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 Q56UQ5 140 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 HSD17B13Q7Z5P4 300 aaPredicted RBP11.41□□□□□ -0.58
USP38-201ENST00000307017 MRGPREQ86SM8 312 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 ZNF799Q96GE5 643 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 SLC25A21Q9BQT8 299 aaPredicted RBP11.41□□□□□ -0.58
USP38-201ENST00000307017 OR3A4PP47883 348 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 ISG20Q96AZ6 181 aaKnown RBP11.41□□□□□ -0.58
USP38-201ENST00000307017 RNF2Q99496 336 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 CITED2Q99967 270 aaPredicted RBP11.41□□□□□ -0.58
USP38-201ENST00000307017 DUSP23Q9BVJ7 150 aa11.41□□□□□ -0.58
USP38-201ENST00000307017 BLACEA4D250 179 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 HAX1O00165 279 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 DNPH1O43598 174 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 CXCL13O43927 109 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 CST5P28325 142 aaPredicted RBP11.4□□□□□ -0.58
USP38-201ENST00000307017 OR2F1Q13607 317 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 DYNC2LI1Q8TCX1 351 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 MOB3AQ96BX8 217 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 KTI12Q96EK9 354 aaPredicted RBP11.4□□□□□ -0.58
USP38-201ENST00000307017 RTL8AQ9BWD3 113 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 GSX2Q9BZM3 304 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 ZNF195O14628 629 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 IGF2P01344 180 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 ST6GAL1P15907 406 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 C3AR1Q16581 482 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 ZNF880Q6PDB4 577 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 OR2AK2Q8NG84 335 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 LINC00052Q96N35 136 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 PIGBOS1A0A0B4J2F0 54 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 CLN3Q13286 438 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 ACOT6Q3I5F7 207 aaPredicted RBP11.4□□□□□ -0.58
USP38-201ENST00000307017 CBY1Q9Y3M2 126 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 A0A1B0GUL6 1792 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 OR5H8P0DN80 308 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 OPRK1P41145 380 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 TNFRSF4P43489 277 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 PPP2CBP62714 309 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 ZNF573Q86YE8 665 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 AMER3Q8N944 861 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 OR8D4Q8NGM9 314 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 ASIC5Q9NY37 505 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 USP3Q9Y6I4 520 aa11.4□□□□□ -0.58
USP38-201ENST00000307017 GPRIN2O60269 458 aa11.4□□□□□ -0.59
USP38-201ENST00000307017 CD37P11049 281 aa11.4□□□□□ -0.59
USP38-201ENST00000307017 OR2L13Q8N349 312 aa11.4□□□□□ -0.59
USP38-201ENST00000307017 TMEM272A0A1B0GTI8 110 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 A0A1B0GTQ1 180 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 MBLAC1A4D2B0 266 aaPredicted RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 OR4C46A6NHA9 309 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 TPPP2P59282 170 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 YIPF6Q96EC8 236 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 CNTD2Q9H8S5 307 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 SAGE1Q9NXZ1 904 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 CRYAAP02489 173 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 CEACAM6P40199 344 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 CLDN15P56746 228 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 RBPJQ06330 500 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 SELENBP1Q13228 472 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 THEM4Q5T1C6 240 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 RTN4RL1Q86UN2 441 aaPredicted RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 LSRQ86X29 649 aaPredicted RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 DUSP18Q8NEJ0 188 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 MEGF10Q96KG7 1140 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 NAT8BQ9UHF3 227 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 OTOFQ9HC10 1997 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 CYR61O00622 381 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 HEXAP06865 529 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 PSMB2P49721 201 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 FAM78BQ5VT40 261 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 DHRS11Q6UWP2 260 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 DOK3Q7L591 496 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 C6orf201Q7Z4U5 140 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 C16orf52Q8NHV5 167 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 FLYWCH2Q96CP2 140 aaKnown RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 SIRT5Q9NXA8 310 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 PMS2P1A4D2B8 440 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 CA6P23280 308 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 SELENOPP49908 381 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 ADPRHP54922 357 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 ALKAL1Q6UXT8 129 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 CBLN2Q8IUK8 224 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 KCTD12Q96CX2 325 aaKnown RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 SLC46A1Q96NT5 459 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 MED17Q9NVC6 651 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 LRRC30A6NM36 301 aa11.39□□□□□ -0.59
USP38-201ENST00000307017 SLC25A5P05141 298 aaKnown RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 HOXB3P14651 431 aaPredicted RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 SNRPGP62308 76 aaKnown RBP11.39□□□□□ -0.59
USP38-201ENST00000307017 CEBPEQ15744 281 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms