RNA–Protein interactions for RNA: ENST00000306853.1

CSPG4P2Y-201, Transcript of CSPG4 pseudogene 2 Y-linked, humanhuman

TSL 1 (best) BASIC

Gene CSPG4P2Y, Length 795 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P2Y-201ENST00000306853 ZDHHC23Q8IYP9 409 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 SYS1Q8N2H4 156 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 STX19Q8N4C7 294 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 KLHL36Q8N4N3 616 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CCDC54Q8NEL0 328 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 BPIFB6Q8NFQ5 453 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PIGCQ92535 297 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 RORBQ92753 470 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ERGIC1Q969X5 290 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 MICU1Q9BPX6 476 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 RTL8AQ9BWD3 113 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 NARFLQ9H6Q4 476 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 FN3KRPQ9HA64 309 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 FGF20Q9NP95 211 aaPredicted RBP9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 TMEM106BQ9NUM4 274 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CNOT2Q9NZN8 540 aaKnown RBP9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ENPP5Q9UJA9 477 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 SLC22A13Q9Y226 551 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PIGLQ9Y2B2 252 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 MPC1Q9Y5U8 109 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CACNG2Q9Y698 323 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 AKAP9Q99996 3911 aa9.31□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 IGHV4-61A0A0C4DH41 118 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 IGHV3-64DA0A0J9YX35 117 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 A0A1B0GWJ7 208 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 hCG_1807616A0A1W2PRN6 198 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ZNF850A8MQ14 1090 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 SYT7O43581 403 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CST4P01036 141 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 IGLV3-1P01715 115 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CCDC159P0C7I6 412 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PIPP12273 146 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ZNF12P17014 697 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ACKR3P25106 362 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 MVKQ03426 396 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 SPRNQ5BIV9 151 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 AVPI1Q5T686 147 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ZBTB37Q5TC79 503 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 TMEM244Q5VVB8 128 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PRAMEF6Q5VXH4 476 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CLEC9AQ6UXN8 241 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 AHSA2Q719I0 299 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 MOGAT3Q86VF5 341 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 EGFL6Q8IUX8 553 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 OR2G2Q8NGZ5 317 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ZNF420Q8TAQ5 688 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PELI1Q96FA3 418 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 TMEM80Q96HE8 168 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 GAL3ST1Q99999 423 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 JAM3Q9BX67 310 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ANKRD60Q9BZ19 345 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 COMMD4Q9H0A8 199 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 Q9H521 79 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 GCM1Q9NP62 436 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 SCN3BQ9NY72 215 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 DIMT1Q9UNQ2 313 aaKnown RBP9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CAB39Q9Y376 341 aaPredicted RBP9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 RHBDD3Q9Y3P4 386 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 WIPI2Q9Y4P8 454 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 NPTNQ9Y639 398 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 F8P00451 2351 aa9.3□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 A0A096LNT2 108 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 LOC107986453A0A1B0GWG9 222 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 LRP5LA4QPB2 252 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 DHRS7CA6NNS2 312 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 SLC1A7O00341 560 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 MYL12BO14950 172 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 XPNPEP2O43895 674 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 GRPP07492 148 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 RPSAP08865 295 aaKnown RBP9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 FAHP16930 419 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 MYF6P23409 242 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 GATA4P43694 442 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 GZMKP49863 264 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CDH15P55291 814 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CSNK2BP67870 215 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ST3GAL4Q11206 333 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 MAB21L1Q13394 359 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ALKBH1Q13686 389 aaKnown RBP9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 TMEM249Q2WGJ8 235 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PLCXD3Q63HM9 321 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PRSS35Q8N3Z0 413 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ZNF676Q8N7Q3 588 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PLPP7Q8NBV4 271 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 FBLIM1Q8WUP2 373 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 GGHQ92820 318 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PPP1R14AQ96A00 147 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 RAB39BQ96DA2 213 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 CNBD2Q96M20 576 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 SOX7Q9BT81 388 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 PLCXD1Q9NUJ7 323 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 UFSP2Q9NUQ7 469 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 RAB26Q9ULW5 256 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 V9GYS6 101 aa9.29□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 DOCK11Q5JSL3 2073 aa9.28□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 ITPR3Q14573 2671 aa9.28□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 TMEM210A6NLX4 147 aa9.28□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 TMEM212A6NML5 194 aa9.28□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 TMEM178BH3BS89 294 aa9.28□□□□□ -0.92
CSPG4P2Y-201ENST00000306853 H3BSH0 61 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms