RNA–Protein interactions for RNA: ENST00000305364.8

TRIM35-201, Transcript of tripartite motif containing 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM35, Length 4,229 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-201ENST00000305364 C5orf52A6NGY3 159 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 OTOL1A6NHN0 477 aaPredicted RBP11.64□□□□□ -0.55
TRIM35-201ENST00000305364 VSIG8P0DPA2 414 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 SULT1A2P50226 295 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 DAP3P51398 398 aaKnown RBP11.64□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF239Q16600 458 aaKnown RBP11.64□□□□□ -0.55
TRIM35-201ENST00000305364 SP6Q3SY56 376 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF610Q8N9Z0 462 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 SUMF1Q8NBK3 374 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 OR2G3Q8NGZ4 309 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 SLAMF6Q96DU3 332 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 CRLF2Q9HC73 371 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 MED29Q9NX70 200 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 LRFN1Q9P244 771 aa11.64□□□□□ -0.55
TRIM35-201ENST00000305364 AHCTF1Q8WYP5 2266 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 F5H5K5 113 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 SOCS1O15524 211 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 GSTP1P09211 210 aaKnown RBP11.63□□□□□ -0.55
TRIM35-201ENST00000305364 OR2T2Q6IF00 324 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 CATSPERDQ86XM0 798 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 A0A1W2PPE3 182 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 HEXAP06865 529 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF735P0CB33 412 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 Q3ZCU0 254 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 HIST2H3PS2Q5TEC6 136 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 GPR119Q8TDV5 335 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 C2orf72A6NCS6 295 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 H0YIZ8 118 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 C1QL1O75973 258 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 NSDHLQ15738 373 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 ZFP62Q8NB50 900 aaPredicted RBP11.63□□□□□ -0.55
TRIM35-201ENST00000305364 RSC1A1Q92681 617 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 SYT3Q9BQG1 590 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 RNF126Q9BV68 326 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 PLEKHA2Q9HB19 425 aa11.63□□□□□ -0.55
TRIM35-201ENST00000305364 UBE2J1Q9Y385 318 aaPredicted RBP11.63□□□□□ -0.55
TRIM35-201ENST00000305364 A8MVM7 634 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 MT-ATP6P00846 226 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 PRF1P14222 555 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 HIST1H1DP16402 221 aaKnown RBP11.62□□□□□ -0.55
TRIM35-201ENST00000305364 GNRHRP30968 328 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 SLC35A1P78382 337 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 SGCBQ16585 318 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 NSUN5P2Q63ZY6 315 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 Q7L0L9 218 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 LFNGQ8NES3 379 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 GPX7Q96SL4 187 aaPredicted RBP11.62□□□□□ -0.55
TRIM35-201ENST00000305364 SLC5A7Q9GZV3 580 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 PBOV1Q9GZY1 135 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 IGKV1D-42A0A075B6H8 117 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 TCRBV21S2A2A0A5A6 115 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF724A8MTY0 619 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 UBE2CO00762 179 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 CT45A8P0DMV1 189 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 CT45A9P0DMV2 189 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 OR1D4P47884 311 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 POLR2HP52434 150 aaKnown RBP11.62□□□□□ -0.55
TRIM35-201ENST00000305364 CT45A2Q5DJT8 189 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 PLXDC2Q6UX71 529 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 LMX1AQ8TE12 382 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 SDHAF3Q9NRP4 125 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 MTCL1Q9Y4B5 1905 aaKnown RBP11.62□□□□□ -0.55
TRIM35-201ENST00000305364 E5RGE8 158 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 TLX3O43711 291 aaPredicted RBP11.62□□□□□ -0.55
TRIM35-201ENST00000305364 BIDP55957 195 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 ZNF684Q5T5D7 378 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 TMEM217Q8N7C4 229 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 BHLHE23Q8NDY6 225 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 OR2I1PQ8NGU4 316 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 SLC39A7Q92504 469 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 SGK3Q96BR1 496 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 TGM7Q96PF1 710 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 NXT1Q9UKK6 140 aaKnown RBP11.62□□□□□ -0.55
TRIM35-201ENST00000305364 PADI1Q9ULC6 663 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 SLC7A11Q9UPY5 501 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 NSG2Q9Y328 171 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 A0A1B0GV90 55 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 GPR37O15354 613 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 CYTIPO60759 359 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 LILRB3O75022 631 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 MELTFP08582 738 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 QDPRP09417 244 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 IDH3GP51553 393 aaPredicted RBP11.62□□□□□ -0.55
TRIM35-201ENST00000305364 PPP1CAP62136 330 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 ARL6IP1Q15041 203 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 COMMD1Q8N668 190 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 DEFB119Q8N690 84 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 KLRF1Q9NZS2 232 aa11.62□□□□□ -0.55
TRIM35-201ENST00000305364 A0A087X0M5 115 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 A0A1B0GX30 115 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 BTBD17A6NE02 478 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 STMND1H3BQB6 276 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 IL2RAP01589 272 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 H2AFB1P0C5Y9 115 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 RNF224P0DH78 156 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 FCGR2AP12318 317 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 HSD11B2P80365 405 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 PNLIPRP3Q17RR3 467 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 PRTGQ2VWP7 1150 aa11.61□□□□□ -0.55
TRIM35-201ENST00000305364 ANKRD55Q3KP44 614 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms