RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 MYOZ1Q9NP98 299 aaPredicted RBP16.95■□□□□ 0.3
HOXC4-201ENST00000303406 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.95■□□□□ 0.3
HOXC4-201ENST00000303406 KLK13Q9UKR3 277 aa16.95■□□□□ 0.3
HOXC4-201ENST00000303406 ANAPC10Q9UM13 185 aa16.95■□□□□ 0.3
HOXC4-201ENST00000303406 ZNF175Q9Y473 711 aa16.95■□□□□ 0.3
HOXC4-201ENST00000303406 WDFY3Q8IZQ1 3526 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 TRGV5A0A0B4J1U4 118 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 TMEM235A6NFC5 223 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 XRCC2O43543 280 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 HPXP02790 462 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 LCATP04180 440 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 ITGB2P05107 769 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 PTGFRP43088 359 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 ARF1P84077 181 aaKnown RBP16.94■□□□□ 0.3
HOXC4-201ENST00000303406 HGFACQ04756 655 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 CNN3Q15417 329 aaKnown RBP16.94■□□□□ 0.3
HOXC4-201ENST00000303406 SFRP5Q5T4F7 317 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 ZBTB37Q5TC79 503 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 ZNF626Q68DY1 528 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 TMPRSS7Q7RTY8 843 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 SLC36A1Q7Z2H8 476 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 DPPA2Q7Z7J5 298 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 FJX1Q86VR8 437 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 MCEMP1Q8IX19 187 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 FAM89BQ8N5H3 189 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 CHST4Q8NCG5 386 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 DACT3Q96B18 629 aaPredicted RBP16.94■□□□□ 0.3
HOXC4-201ENST00000303406 APH1AQ96BI3 265 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 WDYHV1Q96HA8 205 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 SLA2Q9H6Q3 261 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 SLC2A8Q9NY64 477 aa16.94■□□□□ 0.3
HOXC4-201ENST00000303406 MED13Q9UHV7 2174 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 MEIS3P1A6NDR6 274 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 ZNF736B4DX44 427 aaPredicted RBP16.93■□□□□ 0.3
HOXC4-201ENST00000303406 PYCARD-AS1I3L0S3 204 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 NKX2-8O15522 239 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 CREBL2O60519 120 aaPredicted RBP16.93■□□□□ 0.3
HOXC4-201ENST00000303406 MPIG6BO95866 241 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 CEACAM1P13688 526 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 PRKACBP22694 351 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 RAD52P43351 418 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 ARL6IP1Q15041 203 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 TMEM42Q69YG0 159 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 RNF144BQ7Z419 303 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 VASH2Q86V25 355 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 STEAP2Q8NFT2 490 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 OR4D10Q8NGI6 311 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 OR51S1Q8NGJ8 323 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 FGFBP3Q8TAT2 258 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 SPSB4Q96A44 273 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 TECTBQ96PL2 329 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 SPACA5Q96QH8 159 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 GAL3ST1Q99999 423 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 TM2D1Q9BX74 207 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 C1QTNF5Q9BXJ0 243 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 IRF2BPLQ9H1B7 796 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 CALHM2Q9HA72 323 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 SCP2D1Q9UJQ7 156 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 ZNF222Q9UK12 451 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 LIPGQ9Y5X9 500 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 CACNA1HO95180 2353 aa16.93■□□□□ 0.3
HOXC4-201ENST00000303406 DISC1C4P0D8 188 aa16.92■□□□□ 0.3
HOXC4-201ENST00000303406 ZNF735P0CB33 412 aa16.92■□□□□ 0.3
HOXC4-201ENST00000303406 RPS27AP62979 156 aaKnown RBP16.92■□□□□ 0.3
HOXC4-201ENST00000303406 COLCA1Q6ZS62 124 aa16.92■□□□□ 0.3
HOXC4-201ENST00000303406 TRAPPC6BQ86SZ2 158 aa16.92■□□□□ 0.3
HOXC4-201ENST00000303406 BEST4Q8NFU0 473 aa16.92■□□□□ 0.3
HOXC4-201ENST00000303406 LDAHQ9H6V9 325 aa16.92■□□□□ 0.3
HOXC4-201ENST00000303406 PTPRBP23467 1997 aa16.92■□□□□ 0.3
HOXC4-201ENST00000303406 A0A0A6YYD4 124 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 hCG_38984A0A1B0GV85 526 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 FABP7O15540 132 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 ATP6V1G1O75348 118 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 CA11O75493 328 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 IGHG3P01860 377 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 FCGR2AP12318 317 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 HIST1H1DP16402 221 aaKnown RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 NAT1P18440 290 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 NDUFA5Q16718 116 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 PABPC1L2AQ5JQF8 200 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 CLVS2Q5SYC1 327 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 TMEM104Q8NE00 496 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 RAB3CQ96E17 227 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 GON7Q9BXV9 100 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 SELENOIQ9C0D9 397 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 TTC28Q96AY4 2481 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 FOXI3A8MTJ6 420 aaPredicted RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 PATE4P0C8F1 98 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 CXCL3P19876 107 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 ANXA7P20073 488 aaKnown RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 ACKR3P25106 362 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 CBX5P45973 191 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 OR8B8Q15620 311 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 ASCC1Q8N9N2 400 aaKnown RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 OR8S1Q8NH09 359 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 CCDC107Q8WV48 283 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 TNFAIP8L1Q8WVP5 186 aa16.91■□□□□ 0.3
HOXC4-201ENST00000303406 DVL3Q92997 716 aaPredicted RBP16.91■□□□□ 0.3
HOXC4-201ENST00000303406 CMBLQ96DG6 245 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms