RNA–Protein interactions for RNA: ENST00000303383.7

SHCBP1-201, Transcript of SHC binding and spindle associated 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHCBP1, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-201ENST00000303383 CRTAPO75718 401 aaPredicted RBP12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 SCGNO76038 276 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 CRYABP02511 175 aaKnown RBP12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 HOXC12P31275 282 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 FAM189A2Q15884 450 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 GSG1Q2KHT4 349 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 SFRP4Q6FHJ7 346 aaPredicted RBP12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 TNFAIP8L1Q8WVP5 186 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 CST11Q9H112 138 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 NAP1L6A6NFF2 107 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 SS18L1O75177 396 aaPredicted RBP12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 IGLV3-1P01715 115 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 ALDOBP05062 364 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 UBBP0CG47 229 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 VSIG8P0DPA2 414 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 KLF9Q13886 244 aaPredicted RBP12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 OR2A2Q6IF42 318 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 DPPA2Q7Z7J5 298 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 OR1K1Q8NGR3 316 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 FAM230AA0A1W2PPH8 454 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 GTF2F2P13984 249 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 VEGFCP49767 419 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 CCR6P51684 374 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 MTCP1P56278 107 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 ALKBH2Q6NS38 261 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 Q6ZS92 163 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 UTS2BQ765I0 119 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 FGD2Q7Z6J4 655 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 SPACA3Q8IXA5 215 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 UPRTQ96BW1 309 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 ITPKCQ96DU7 683 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 URM1Q9BTM9 101 aaKnown RBP12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 TMEM59Q9BXS4 323 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 SLC7A11Q9UPY5 501 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 NUBP2Q9Y5Y2 271 aa12.63□□□□□ -0.39
SHCBP1-201ENST00000303383 DHRS7CA6NNS2 312 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 AHRRA9YTQ3 701 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 WISP2O76076 250 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 TPOP07202 933 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 CSF1P09603 554 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 CD37P11049 281 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 ACTBP60709 375 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 ACTG1P63261 375 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 GUCA2AQ02747 115 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 UBE2V2Q15819 145 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 MRPL21Q7Z2W9 205 aaKnown RBP12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 WNT2BQ93097 391 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 BORCS8Q96FH0 119 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 IGKV1-9A0A0C4DH69 117 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 RAD51DO75771 328 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 TCRBP04435 133 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 PRKACBP22694 351 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 GSK3AP49840 483 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF92Q03936 586 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 PIGCQ92535 297 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 RNF170Q96K19 258 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 MARVELD1Q9BSK0 173 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 HRASLSQ9HDD0 168 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 ZNF224Q9NZL3 707 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 NPAP1Q9NZP6 1156 aa12.62□□□□□ -0.39
SHCBP1-201ENST00000303383 H7C417 338 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 NRASP01111 189 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 TMEM225BP0DP42 221 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 COX5BP10606 129 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 CD300CQ08708 224 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 TBRG1Q3YBR2 411 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 CLVS2Q5SYC1 327 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 FAM180AQ6UWF9 173 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 OR8S1Q8NH09 359 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 BANF2Q9H503 90 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 MTFP1Q9UDX5 166 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 MYO7BQ6PIF6 2116 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 RP1L1Q8IWN7 2480 aaPredicted RBP12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 OR14I1A6ND48 311 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 PLATP00750 562 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 PRF1P14222 555 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 ACKR3P25106 362 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 PTGFRP43088 359 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 OR2W3Q7Z3T1 314 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 APOBEC3DQ96AK3 386 aaPredicted RBP12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 LOC100509620A0A075B734 347 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 ANKRD20A5PA0PJZ0 165 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 LDLRAD4O15165 306 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 LYZL6O75951 148 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 Q6ZTK2 550 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 MOB3CQ70IA8 216 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 LYPD6Q86Y78 171 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 SPSB1Q96BD6 273 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 C1QTNF5Q9BXJ0 243 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 KCNN3Q9UGI6 736 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 ALG5Q9Y673 324 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 AKAP13Q12802 2813 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 GTF3C1Q12789 2109 aa12.61□□□□□ -0.39
SHCBP1-201ENST00000303383 ARHGAP21Q5T5U3 1957 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 TMEM235A6NFC5 223 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 IL18BPO95998 194 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 PDGFAP04085 211 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 LPLP06858 475 aa12.6□□□□□ -0.39
SHCBP1-201ENST00000303383 SERPINA2P20848 420 aa12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms