RNA–Protein interactions for RNA: ENST00000300933.8

TPM4-201, Transcript of tropomyosin 4, humanhuman

TSL 1 (best) BASIC

Gene TPM4, Length 2,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-201ENST00000300933 NPIPA3F8WFD2 350 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 CSF1P09603 554 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 TSPAN7P41732 249 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 MOB3CQ70IA8 216 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 LHX6Q9UPM6 363 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 LAMA5O15230 3695 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 ZNF407Q9C0G0 2248 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 CCSO14618 274 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 CYC1P08574 325 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 LIPCP11150 499 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 NTF4P34130 210 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 ACER2Q5QJU3 275 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 OR2W3Q7Z3T1 314 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 OR8B12Q8NGG6 310 aa19.32■□□□□ 0.68
TPM4-201ENST00000300933 PINLYPA6NC86 204 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 OR5H15A6NDH6 313 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 ZNF878C9JN71 531 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 F5H5K5 113 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 P04436 131 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 AKAIN1P0CW23 69 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 PRSS3P35030 304 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 CSNK1A1P48729 337 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 HIST3H3Q16695 136 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 HFEQ30201 348 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 WIPI1Q5MNZ9 446 aaPredicted RBP19.31■□□□□ 0.68
TPM4-201ENST00000300933 LDLRAD3Q86YD5 345 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 ADPRHL1Q8NDY3 354 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 STEAP2Q8NFT2 490 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 OR1S2Q8NGQ3 325 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 ROBO4Q8WZ75 1007 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 VRK1Q99986 396 aaPredicted RBP19.31■□□□□ 0.68
TPM4-201ENST00000300933 PNRC2Q9NPJ4 139 aaKnown RBP19.31■□□□□ 0.68
TPM4-201ENST00000300933 GPR84Q9NQS5 396 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 A0A1B0GTI1 187 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 CBR3O75828 277 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 F12P00748 615 aaPredicted RBP19.31■□□□□ 0.68
TPM4-201ENST00000300933 OR4E1P0C645 316 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 PRSS12P56730 875 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 JMJD6Q6NYC1 403 aaPredicted RBP19.31■□□□□ 0.68
TPM4-201ENST00000300933 ZNF813Q6ZN06 617 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 DTX1Q86Y01 620 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 C12orf45Q8N5I9 185 aaPredicted RBP19.31■□□□□ 0.68
TPM4-201ENST00000300933 ZNF283Q8N7M2 679 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 C2CD4CQ8TF44 421 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 C15orf40Q8WUR7 153 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 ASF1BQ9NVP2 202 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 NDRG3Q9UGV2 375 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 PCDHB10Q9UN67 800 aa19.31■□□□□ 0.68
TPM4-201ENST00000300933 CNOT1A5YKK6 2376 aaKnown RBP19.31■□□□□ 0.68
TPM4-201ENST00000300933 TMEM235A6NFC5 223 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 OR5H14A6NHG9 310 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 KCNAB3O43448 404 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 FSTP19883 344 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 PDCD10Q9BUL8 212 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 M0QYG6 137 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 CDX4O14627 284 aaPredicted RBP19.3■□□□□ 0.68
TPM4-201ENST00000300933 PMS2P2O95744 297 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 CSN2P05814 226 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 PVALBP20472 110 aaPredicted RBP19.3■□□□□ 0.68
TPM4-201ENST00000300933 MNDAP41218 407 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 CX3CR1P49238 355 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 MPPED2Q15777 294 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 DBX2Q6ZNG2 339 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 OR9K2Q8NGE7 335 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 THRSPQ92748 146 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 UQCC2Q9BRT2 126 aa19.3■□□□□ 0.68
TPM4-201ENST00000300933 DBHP09172 617 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 BDKRB2P30411 391 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 RAB13P51153 203 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 STEAP1BQ6NZ63 245 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 DHRS13Q6UX07 377 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 ZIC4Q8N9L1 334 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 NPRL2Q8WTW4 380 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 TAS2R8Q9NYW2 309 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 A0A087WZY1 265 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 F8W036 122 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 CD63P08962 238 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 CD59P13987 128 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 SLC6A9P48067 706 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 DNM1P46Q6ZS02 220 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 ZFP82Q8N141 532 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 OR1M1Q8NGA1 313 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 LIN37Q96GY3 246 aaPredicted RBP19.29■□□□□ 0.68
TPM4-201ENST00000300933 THOC3Q96J01 351 aaKnown RBP19.29■□□□□ 0.68
TPM4-201ENST00000300933 HES7Q9BYE0 225 aa19.29■□□□□ 0.68
TPM4-201ENST00000300933 A0A0D9SG52 128 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 WIPF3A6NGB9 483 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 TLX3O43711 291 aaPredicted RBP19.28■□□□□ 0.68
TPM4-201ENST00000300933 SUCLG1P53597 346 aaKnown RBP19.28■□□□□ 0.68
TPM4-201ENST00000300933 PPIAP62937 165 aaKnown RBP19.28■□□□□ 0.68
TPM4-201ENST00000300933 PMPCAQ10713 525 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 UNQ6126/PRO20091Q6UXV3 157 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 OR4S1Q8NGB4 309 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 ZMAT5Q9UDW3 170 aaKnown RBP19.28■□□□□ 0.68
TPM4-201ENST00000300933 COL27A1Q8IZC6 1860 aaPredicted RBP19.28■□□□□ 0.68
TPM4-201ENST00000300933 PATE4P0C8F1 98 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 ADCYAP1P18509 176 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 SLC22A6Q4U2R8 563 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 LIN54Q6MZP7 749 aa19.28■□□□□ 0.68
TPM4-201ENST00000300933 ADGRE4PQ86SQ3 457 aa19.28■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms