RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 TAAR6Q96RI8 345 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 DHRS9Q9BPW9 319 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 KCNK15Q9H427 330 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 A0A1W2PRD5 423 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 A0A1W2PRF3 423 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 A0A1W2PRM7 423 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 PMS2P1A4D2B8 440 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 FAM90A27PA6NNH2 459 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF17P17021 662 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 LSRQ86X29 649 aaPredicted RBP12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ARHGEF39Q8N4T4 335 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 CTDSP1Q9GZU7 261 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 SERGEFQ9UGK8 458 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 NDRG3Q9UGV2 375 aa12.21□□□□□ -0.45
CHRFAM7A-201ENST00000299847 ZNF785A8K8V0 405 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PYCARD-AS1I3L0S3 204 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 FZD2Q14332 565 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 Q6ZNB5 142 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 LFNGQ8NES3 379 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OR11G2Q8NGC1 345 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OR2V1Q8NHB1 315 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ZNF251Q9BRH9 671 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ADAT1Q9BUB4 502 aaKnown RBP12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SCPEP1Q9HB40 452 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 HOXB3P14651 431 aaPredicted RBP12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 EVX1P49640 407 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TAS2R45P59539 299 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GPX8Q8TED1 209 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MRGPRX4Q96LA9 322 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TMEM9BQ9NQ34 198 aa12.21□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CACNA1SQ13698 1873 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CROCCQ5TZA2 2017 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 E5RGE8 158 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 KLK10O43240 276 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SRFP11831 508 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PTTG1IPP53801 180 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ARHGDIGQ99819 225 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DLL4Q9NR61 685 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NSG2Q9Y328 171 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ATF1P18846 271 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PCBP4P57723 403 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SPNS3Q6ZMD2 512 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ANKRD33Q7Z3H0 272 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GALNT16Q8N428 558 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ST8SIA1Q92185 356 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SARAFQ96BY9 339 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GALMQ96C23 342 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 COL16A1Q07092 1604 aaPredicted RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SHROOM3Q8TF72 1996 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RAE1P78406 368 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SMAD4Q13485 552 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DUS3LQ96G46 650 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 C2orf50Q96LR7 162 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RPP25Q9BUL9 199 aaKnown RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SLC25A19Q9HC21 320 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SLX4Q8IY92 1834 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 VAMP5O95183 116 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 IGLV3-25P01717 112 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CELA2BP08218 269 aaPredicted RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RTN4IP1Q8WWV3 396 aaPredicted RBP12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 C20orf141Q9NUB4 165 aa12.2□□□□□ -0.46
CHRFAM7A-201ENST00000299847 A0A087WUJ7 227 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 KRASP01116 189 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 BPIFB3P59826 476 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SPEM2Q0P670 501 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 Q1RN00 199 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 Q56UQ5 140 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SLC2A8Q9NY64 477 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TOGARAM1Q9Y4F4 1720 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ANKUB1A6NFN9 424 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TAAR5O14804 337 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PATE4P0C8F1 98 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CA6P23280 308 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MRPL58Q14197 206 aaKnown RBP12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CLEC9AQ6UXN8 241 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ADGRG7Q96K78 797 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 LURAP1Q96LR2 239 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NAGKQ9UJ70 344 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MYO9BQ13459 2157 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 EPXP11678 715 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ABCD3P28288 659 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 RAB35Q15286 201 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NCR3LG1Q68D85 454 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 OR2T2Q6IF00 324 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 SFTPA1Q8IWL2 248 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 KIAA1958Q8N8K9 716 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 BLNKQ8WV28 456 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 NDFIP1Q9BT67 221 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 TEX101Q9BY14 249 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PRR13Q9NZ81 148 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 GABRG2P18507 467 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CEACAM6P40199 344 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CCR5P51681 352 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 MAFAQ8NHW3 353 aaPredicted RBP12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 POMT2Q9UKY4 750 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 M0R1X1 148 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 DHHO43323 396 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 PMCHP20382 165 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 ERVFC1-1P60608 527 aa12.19□□□□□ -0.46
CHRFAM7A-201ENST00000299847 CLDN23Q96B33 292 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms