RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ERVS71-1P61550 626 aa21.17■□□□□ 0.98
GTF2A1-201ENST00000298173 HES5Q5TA89 166 aa21.17■□□□□ 0.98
GTF2A1-201ENST00000298173 CDH26Q8IXH8 852 aa21.17■□□□□ 0.98
GTF2A1-201ENST00000298173 OR56B2PQ8NGI1 322 aa21.17■□□□□ 0.98
GTF2A1-201ENST00000298173 HCFC1P51610 2035 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 ZNF816-ZNF321PA0A0X1KG74 233 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 CD300LBA8K4G0 201 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 PRF1P14222 555 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 CD40P25942 277 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 C1orf100Q5SVJ3 147 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 CLVS2Q5SYC1 327 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 SPATA46Q5T0L3 261 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 UBASH3BQ8TF42 649 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 FOXRED1Q96CU9 486 aaPredicted RBP21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 MIXL1Q9H2W2 232 aa21.16■□□□□ 0.98
GTF2A1-201ENST00000298173 GGT3PA6NGU5 568 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 SLC17A2O00624 439 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 CRYAAP02489 173 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 ERCC1P07992 297 aaPredicted RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 RAC2P15153 192 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 GRNP28799 593 aaKnown RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 SORDQ00796 357 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 MZT2AQ6P582 158 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 XKRXQ6PP77 449 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 CRIP3Q6Q6R5 217 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 WFDC8Q8IUA0 241 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 CSNK2A3Q8NEV1 391 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 SLC25A28Q96A46 364 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 HAVCR1Q96D42 359 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 CMBLQ96DG6 245 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 LRRC46Q96FV0 321 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 ZC3HAV1LQ96H79 300 aaKnown RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 COMMD3Q9UBI1 195 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 PAHP00439 452 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 CST4P01036 141 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 NKX6-1P78426 367 aaPredicted RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 RNF144BQ7Z419 303 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 KLF14Q8TD94 323 aaPredicted RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 ITLN2Q8WWU7 325 aaPredicted RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 PIGTQ969N2 578 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 METTL17Q9H7H0 456 aaPredicted RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 PPP1R3EQ9H7J1 279 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 ABCB9Q9NP78 766 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 CRIM1Q9NZV1 1036 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 CGGBP1Q9UFW8 167 aaPredicted RBP21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 STEAP1Q9UHE8 339 aa21.15■□□□□ 0.98
GTF2A1-201ENST00000298173 A0A0B4J203 849 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 DPRXA6NFQ7 191 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 NRASP01111 189 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 PTAFRP25105 342 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 S100A5P33763 92 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 DDI2Q5TDH0 399 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 TMEM108Q6UXF1 575 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 WDFY2Q96P53 400 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 UQCC2Q9BRT2 126 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 MRI1Q9BV20 369 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 LIN7BQ9HAP6 207 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 AKIP1Q9NQ31 210 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 GPR173Q9NS66 373 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 KCNN3Q9UGI6 736 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 CMAHPQ9Y471 501 aa21.14■□□□□ 0.97
GTF2A1-201ENST00000298173 ZG16O60844 167 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 SNRPBP14678 240 aaKnown RBP21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 TNFSF8P32971 234 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 CLDN12P56749 244 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 PSG7Q13046 419 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 DMRTC1Q5HYR2 192 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 OR2T2Q6IF00 324 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 LAX1Q8IWV1 398 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 ZNF808Q8N4W9 903 aaPredicted RBP21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 OR5H6Q8NGV6 325 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 PIGCQ92535 297 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 PLGRKTQ9HBL7 147 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 SPATA2Q9UM82 520 aa21.13■□□□□ 0.97
GTF2A1-201ENST00000298173 KMT2BQ9UMN6 2715 aaPredicted RBP21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 RGS5O15539 181 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 CALCBP10092 127 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 AZGP1P25311 298 aaKnown RBP21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 ZNF93P35789 620 aaPredicted RBP21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 TMEM255AQ5JRV8 349 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 CCDC190Q86UF4 302 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 JAGN1Q8N5M9 183 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 OR6M1Q8NGM8 313 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 SPSB1Q96BD6 273 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 NKX3-1Q99801 234 aaPredicted RBP21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 CNTD2Q9H8S5 307 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 HPGDSO60760 199 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 LILRA1O75019 489 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 CLDN14O95500 239 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 BMP4P12644 408 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 HTR2CP28335 458 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 GLRXP35754 106 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 MPV17P39210 176 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 ETV6P41212 452 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 MBNL2Q5VZF2 373 aaKnown RBP21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 FTMTQ8N4E7 242 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 OR4D6Q8NGJ1 314 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 TRMT10AQ8TBZ6 339 aaKnown RBP21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 TECTBQ96PL2 329 aa21.12■□□□□ 0.97
GTF2A1-201ENST00000298173 SORCS2Q96PQ0 1159 aa21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms