RNA–Protein interactions for RNA: ENST00000296043.6

SHROOM3-201, Transcript of shroom family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM3, Length 11,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-201ENST00000296043 C6orf201Q7Z4U5 140 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 GJD4Q96KN9 370 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 CYSLTR2Q9NS75 346 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 A4GNTQ9UNA3 340 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 ANKRD36A6QL64 1941 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 MPC2O95563 127 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 TSPAN13O95857 204 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 FURINP09958 794 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 PPIAP62937 165 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 SHHQ15465 462 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 NOSIPQ9Y314 301 aaKnown RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 PLSCR5A0PG75 271 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 NPIPB15A6NHN6 443 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 SRSF9Q13242 221 aaKnown RBP eCLIP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 DNLZQ5SXM8 178 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 C20orf141Q9NUB4 165 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 MBD1Q9UIS9 605 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 ZAR1LA6NP61 321 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 VEGFDO43915 354 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 POU3F2P20265 443 aaPredicted RBP10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 WNT7BP56706 349 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 CLDN17P56750 224 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 EDDM3BP56851 147 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 PTOV1Q86YD1 416 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 OR5C1Q8NGR4 320 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 NAT8Q9UHE5 227 aa10.68□□□□□ -0.7
SHROOM3-201ENST00000296043 RIMKLAQ8IXN7 391 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 AURKAIP1Q9NWT8 199 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 TMEM210A6NLX4 147 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 IFITM10A6NMD0 228 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 SEMA4FO95754 770 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 SMIM17P0DL12 118 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 STAC2Q6ZMT1 411 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 MUC15Q8N387 334 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 GGACTQ9BVM4 153 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 RAB33BQ9H082 229 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 GHITMQ9H3K2 345 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 NEURL4Q96JN8 1562 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 EOMESO95936 686 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 PAX5Q02548 391 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 MRPL54Q6P161 138 aaKnown RBP10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 APCDD1Q8J025 514 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 ARHGEF39Q8N4T4 335 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 CHST14Q8NCH0 376 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 ROBO4Q8WZ75 1007 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 RIMS4Q9H426 269 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 SPATA31A5Q5VU36 1347 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 SPATA31A7Q8IWB4 1347 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 IGKV6D-41A0A0C4DH26 115 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 G6PCP35575 357 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 OR8B8Q15620 311 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 SPINT2O43291 252 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 GLSO94925 669 aaPredicted RBP10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 SP6Q3SY56 376 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 TCEAL8Q8IYN2 117 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 MZB1Q8WU39 189 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 ARRDC3Q96B67 414 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 RNF2Q99496 336 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 LOC107984156A0A0G2JMH3 177 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 AOAHP28039 575 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 CRYBB2P43320 205 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC37A1P57057 533 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 ELFN2Q5R3F8 820 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 ERASQ7Z444 233 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 ARL17AQ8IVW1 177 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 FBP1P09467 338 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 ABI3BPQ7Z7G0 1075 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 OR52N4Q8NGI2 321 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 NDFIP1Q9BT67 221 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 DOCK5Q9H7D0 1870 aa10.67□□□□□ -0.7
SHROOM3-201ENST00000296043 M0R082 166 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 APCSP02743 223 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 HIST1H1CP16403 213 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 OTX1P32242 354 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 VHLLQ6RSH7 139 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 SERINC5Q86VE9 423 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 ULBP2Q9BZM5 246 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 F11RQ9Y624 299 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 FZD6O60353 706 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 CER1O95813 267 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 C16orf82Q7Z2V1 217 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 TMEFF1Q8IYR6 380 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 STPG2Q8N412 459 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 UQCR10Q9UDW1 63 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 MRPS2Q9Y399 296 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 PKDCCQ504Y2 493 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 ACSM6Q6P461 480 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 PRR13Q9NZ81 148 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 OTPQ5XKR4 325 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 FAM219AQ8IW50 185 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 SPACA9Q96E40 222 aaPredicted RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC6A18Q96N87 628 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 IL19Q9UHD0 177 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 H3BQ15 152 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 NMUP48645 174 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 LBX1P52954 281 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 ELAVL3Q14576 367 aaKnown RBP10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 INSL4Q14641 139 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 OR1C1Q15619 314 aa10.66□□□□□ -0.7
SHROOM3-201ENST00000296043 SLC35G1Q2M3R5 365 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms