RNA–Protein interactions for RNA: ENST00000293406.7

LSM12-201, Transcript of LSM12 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM12, Length 2,308 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM12-201ENST00000293406 ZNF17P17021 662 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 HNRNPKP61978 463 aaKnown RBP eCLIP16.94■□□□□ 0.3
LSM12-201ENST00000293406 MFAP5Q13361 173 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 AADACL3Q5VUY0 350 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 LHFPL1Q86WI0 220 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 APCDD1LQ8NCL9 501 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 OR51F2Q8NH61 342 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 SLC5A7Q9GZV3 580 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 ZFP57Q9NU63 452 aa16.94■□□□□ 0.3
LSM12-201ENST00000293406 PHF3Q92576 2039 aaKnown RBP16.94■□□□□ 0.3
LSM12-201ENST00000293406 SDCBPO00560 298 aaPredicted RBP16.93■□□□□ 0.3
LSM12-201ENST00000293406 EFNA2O43921 213 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 PGA4P0DJD7 388 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 PGA3P0DJD8 388 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 RFC3P40938 356 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 ZNF41P51814 821 aaPredicted RBP16.93■□□□□ 0.3
LSM12-201ENST00000293406 FAM219AQ8IW50 185 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 CARFQ8N187 725 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 TSTD1Q8NFU3 115 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 SAT2Q96F10 170 aaPredicted RBP16.93■□□□□ 0.3
LSM12-201ENST00000293406 MESP1Q9BRJ9 268 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 OR10A2Q9H208 303 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 RHOFQ9HBH0 211 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 SLC22A11Q9NSA0 550 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 KLRF1Q9NZS2 232 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 GSKIPQ9P0R6 139 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 FAM96BQ9Y3D0 163 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 WIF1Q9Y5W5 379 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 GLRA1P23415 457 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 DHPSP49366 369 aaPredicted RBP16.93■□□□□ 0.3
LSM12-201ENST00000293406 CSNK2A1P68400 391 aaPredicted RBP16.93■□□□□ 0.3
LSM12-201ENST00000293406 CARD17Q5XLA6 110 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 POC1AQ8NBT0 407 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 CSNK2A3Q8NEV1 391 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 NRIP2Q9BQI9 281 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 SDHAF3Q9NRP4 125 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 DNAJB11Q9UBS4 358 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 OSGIN2Q9Y236 505 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 EYSQ5T1H1 3165 aa16.93■□□□□ 0.3
LSM12-201ENST00000293406 RER1O15258 196 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 DUX1O43812 170 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 FARS2O95363 451 aaKnown RBP16.92■□□□□ 0.3
LSM12-201ENST00000293406 OPN1LWP04000 364 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 ANOS1P23352 680 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 SNU13P55769 128 aaKnown RBP16.92■□□□□ 0.3
LSM12-201ENST00000293406 S100A10P60903 97 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 FAM57BQ71RH2 274 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 OR51T1Q8NGJ9 327 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 STT3BQ8TCJ2 826 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 SMIM8Q96KF7 97 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 FGF21Q9NSA1 209 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 EHFQ9NZC4 300 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 PPP4R1LQ9P1A2 415 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 HOXB5P09067 269 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 MUC1P15941 1255 aaPredicted RBP16.92■□□□□ 0.3
LSM12-201ENST00000293406 CAV2P51636 162 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 TAS2R46P59540 309 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 EIF5AP63241 154 aaKnown RBP16.92■□□□□ 0.3
LSM12-201ENST00000293406 ZNF528Q3MIS6 628 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 EIF5AL1Q6IS14 154 aaKnown RBP16.92■□□□□ 0.3
LSM12-201ENST00000293406 DOK3Q7L591 496 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 SYT13Q7L8C5 426 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 CPNE2Q96FN4 548 aaPredicted RBP16.92■□□□□ 0.3
LSM12-201ENST00000293406 MRGPRX4Q96LA9 322 aa16.92■□□□□ 0.3
LSM12-201ENST00000293406 RCC2Q9P258 522 aaKnown RBP16.92■□□□□ 0.3
LSM12-201ENST00000293406 LRP3O75074 770 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 CCL1P22362 96 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 ZNF283Q8N7M2 679 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 ZNF501Q96CX3 271 aaPredicted RBP16.91■□□□□ 0.3
LSM12-201ENST00000293406 TAF9BQ9HBM6 251 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 ACKR4Q9NPB9 350 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 BIN3Q9NQY0 253 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 IGKV1-9A0A0C4DH69 117 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 METTL12A8MUP2 240 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 C2CD4DB7Z1M9 353 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 RPS2P15880 293 aaKnown RBP16.91■□□□□ 0.3
LSM12-201ENST00000293406 LTBRP36941 435 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 P2RY4P51582 365 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 DMRTC1Q5HYR2 192 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 PNLDC1Q8NA58 520 aaKnown RBP16.91■□□□□ 0.3
LSM12-201ENST00000293406 OR5D18Q8NGL1 313 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 MAFIPQ8WZ33 124 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 NECAB3Q96P71 396 aaPredicted RBP16.91■□□□□ 0.3
LSM12-201ENST00000293406 SLC7A5P2Q9GIP4 190 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 PNRC2Q9NPJ4 139 aaKnown RBP16.91■□□□□ 0.3
LSM12-201ENST00000293406 MEMO1Q9Y316 297 aa16.91■□□□□ 0.3
LSM12-201ENST00000293406 FIGNL2A6NMB9 653 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 ETV2O00321 342 aaPredicted RBP16.9■□□□□ 0.3
LSM12-201ENST00000293406 TAAR5O14804 337 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 MTRF1O75570 445 aaKnown RBP16.9■□□□□ 0.3
LSM12-201ENST00000293406 MED6O75586 246 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 SFTPBP07988 381 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 NFYBP25208 207 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 CSNK1EP49674 416 aaKnown RBP16.9■□□□□ 0.3
LSM12-201ENST00000293406 PDZK1IP1Q13113 114 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 IL15RAQ13261 267 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 PLPPR5Q32ZL2 321 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 RPL7L1Q6DKI1 246 aaKnown RBP16.9■□□□□ 0.3
LSM12-201ENST00000293406 SLC25A47Q6Q0C1 308 aa16.9■□□□□ 0.3
LSM12-201ENST00000293406 FAM89BQ8N5H3 189 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms