RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 CREB3L2Q70SY1 520 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 NXF2Q9GZY0 626 aaKnown RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 GLS2Q9UI32 602 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ZNF816-ZNF321PA0A0X1KG74 233 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 A0A1W2PP11 408 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ANKUB1A6NFN9 424 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 XRCC3O43542 346 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ZNF354AO60765 605 aaPredicted RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 HLA-HP01893 362 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 IAPPP10997 89 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 EIF1P41567 113 aaKnown RBP4.27□□□□□ -1.73
UBR1-201ENST00000290650 ARTNQ5T4W7 220 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SEZ6L2Q6UXD5 910 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SLC25A45Q8N413 288 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 ABHD3Q8WU67 409 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SMIM4Q8WVI0 70 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 OXGR1Q96P68 337 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 GPHA2Q96T91 129 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 PILRAQ9UKJ1 303 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 PLXNB3Q9ULL4 1909 aa4.27□□□□□ -1.73
UBR1-201ENST00000290650 SHISA3A0PJX4 238 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 CD300LBA8K4G0 201 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 TGFBR3LH3BV60 316 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 IFNA2P01563 188 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 UBBP0CG47 229 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 BMP5P22003 454 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 FCGR2CP31995 323 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 TAS2R46P59540 309 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 EXT1Q16394 746 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 GSG1Q2KHT4 349 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 TMEM182Q6ZP80 229 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 ATG4DQ86TL0 474 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 NAA40Q86UY6 237 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 SYS1Q8N2H4 156 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 CCDC71LQ8N9Z2 235 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 OR2AK2Q8NG84 335 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 YIPF5Q969M3 257 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 APH1AQ96BI3 265 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 LRRC46Q96FV0 321 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 WDFY2Q96P53 400 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 SSX3Q99909 188 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 HDHD3Q9BSH5 251 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 MED18Q9BUE0 208 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 SARGQ9BW04 601 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 RPH3ALQ9UNE2 315 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ST3GAL6Q9Y274 331 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 PCNX3Q9H6A9 2034 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 PLSCR5A0PG75 271 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 CEBPZOSA8MTT3 80 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 SOCS1O15524 211 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 WDR1O75083 606 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 SCAF4O95104 1147 aaKnown RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 RD3LP0DJH9 198 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 IRF2P14316 349 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 CSF2RBP32927 897 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 INSM1Q01101 510 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 ACSM1Q08AH1 577 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 PDZD11Q5EBL8 140 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 EMC4Q5J8M3 183 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 COL13A1Q5TAT6 717 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 CDH26Q8IXH8 852 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 KCNJ15Q99712 375 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 MRI1Q9BV20 369 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 PCDH15Q96QU1 1955 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 A0A0C4DFX4 3053 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 TXNL1O43396 289 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ONECUT2O95948 504 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ICAM2P13598 275 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 FGF9P31371 208 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 HLXQ14774 488 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 ZNF141Q15928 474 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ZNF529Q6P280 563 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 PRSS35Q8N3Z0 413 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 KCNRGQ8N5I3 272 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ZBTB44Q8NCP5 570 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 NANOS1Q8WY41 292 aaKnown RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 HAS2Q92819 552 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 C4orf45Q96LM5 186 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 RASL10BQ96S79 203 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 MENTQ9BUN1 341 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 WASF3Q9UPY6 502 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 TRAV1-2A0A0B4J238 106 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ZFP92A6NM28 416 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 LYZL6O75951 148 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 OR2F2O95006 317 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 IGF2P01344 180 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 PIGPP57054 158 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 GRB2P62993 217 aaKnown RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 C19orf57Q0VDD7 668 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 DMKNQ6E0U4 476 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 ZFP62Q8NB50 900 aaPredicted RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 DMBX1Q8NFW5 382 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 OR8B12Q8NGG6 310 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ZNF721Q8TF20 911 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 CXorf58Q96LI9 332 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 ZNF416Q9BWM5 594 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 C1orf123Q9NWV4 160 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 LSM2Q9Y333 95 aaKnown RBP4.26□□□□□ -1.73
UBR1-201ENST00000290650 A0A0B4J293 547 aa4.26□□□□□ -1.73
UBR1-201ENST00000290650 OR6C76A6NM76 312 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms