RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 C13orf42A0A1B0GVH6 325 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 ZIC3O60481 467 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 DUS4LO95620 317 aaKnown RBP17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 KLK3P07288 261 aaPredicted RBP17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 CD63P08962 238 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 HOXD4P09016 255 aaPredicted RBP17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 LIFP15018 202 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 TBPP20226 339 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 GUCA1AP43080 201 aaPredicted RBP17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 BAMBIQ13145 260 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 IL11RAQ14626 422 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 SMUG1Q53HV7 270 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 PXDC1Q5TGL8 231 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 OPN5Q6U736 354 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 TERB2Q8NHR7 220 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 ZNF471Q9BX82 626 aaPredicted RBP17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 MBD2Q9UBB5 411 aa17.53■□□□□ 0.4
SCUBE1-201ENST00000290460 D6RAR5 112 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 NPIPA2E9PIF3 369 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 NPIPA3F8WFD2 350 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 MFNGO00587 321 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 OR2F2O95006 317 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 OR2F1Q13607 317 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 ARFRP1Q13795 201 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 ZNF345Q14585 488 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 RSPO1Q2MKA7 263 aaPredicted RBP17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 FAHD2BQ6P2I3 314 aaPredicted RBP17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 OR51T1Q8NGJ9 327 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 NABP1Q96AH0 204 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 FAHD2AQ96GK7 314 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 C5orf66Q9H5L9 145 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 NXT1Q9UKK6 140 aaKnown RBP17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 C5orf51A6NDU8 294 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 STMND1H3BQB6 276 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 BCL2L11O43521 198 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 LSM6P62312 80 aaKnown RBP17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 UBE2V2Q15819 145 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 ZNF468Q5VIY5 522 aaPredicted RBP17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 OVCH2Q7RTZ1 564 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 ARMC10Q8N2F6 343 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 OR56B1Q8NGI3 324 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 ST6GALNAC5Q9BVH7 336 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 ANGPTL4Q9BY76 406 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 DKKL1Q9UK85 242 aa17.52■□□□□ 0.4
SCUBE1-201ENST00000290460 TNFSF11O14788 317 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 SERPINA2P20848 420 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 FKBP2P26885 142 aaKnown RBP17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 SERPINF1P36955 418 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 ACOT7LQ6ZUV0 252 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 TMEM156Q8N614 296 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 GJC3Q8NFK1 279 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 PXT1Q8NFP0 134 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 OR9K2Q8NGE7 335 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 TMEM230Q96A57 120 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 ZNF700Q9H0M5 742 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 OR10A2Q9H208 303 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 PPA2Q9H2U2 334 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 RASL12Q9NYN1 266 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 ANAPC10Q9UM13 185 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 A0A087WZY1 265 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 DBX1A6NMT0 343 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 SDCBPO00560 298 aaPredicted RBP17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 HTR3BO95264 441 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 NAT1P18440 290 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 PTGFRP43088 359 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 SSR4P51571 173 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 BTN1A1Q13410 526 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 C10orf128Q5T292 105 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 TMEM123Q8N131 208 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 THAP6Q8TBB0 222 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 ROBO4Q8WZ75 1007 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 TMEM54Q969K7 222 aa17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 URM1Q9BTM9 101 aaKnown RBP17.51■□□□□ 0.39
SCUBE1-201ENST00000290460 SIGLEC5O15389 551 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 PDGFBP01127 241 aaPredicted RBP17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 IGLV3-1P01715 115 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 DSCR4P56555 118 aaPredicted RBP17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 SIGLEC14Q08ET2 396 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 ECH1Q13011 328 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 SLC9A3R2Q15599 337 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 HSD17B13Q7Z5P4 300 aaPredicted RBP17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 PNLDC1Q8NA58 520 aaKnown RBP17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 SLC39A7Q92504 469 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 PIGTQ969N2 578 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 SLC25A32Q9H2D1 315 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 A0A0J9YW62 118 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 KRBOX1C9JBD0 128 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 AMY2BP19961 511 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 CTSSP25774 331 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 STARP49675 285 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 EXT1Q16394 746 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 VAX1Q5SQQ9 334 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 UNQ6126/PRO20091Q6UXV3 157 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 FAM219AQ8IW50 185 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 OR5H2Q8NGV7 314 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 PAQR8Q8TEZ7 354 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 SRXN1Q9BYN0 137 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 SHARPINQ9H0F6 387 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 GPR132Q9UNW8 380 aa17.5■□□□□ 0.39
SCUBE1-201ENST00000290460 PIGLQ9Y2B2 252 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms