RNA–Protein interactions for RNA: ENST00000288022.1

PDF-201, Transcript of peptide deformylase, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDF, Length 1,158 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDF-201ENST00000288022 PPIAL4FP0DN26 164 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 MAP2K3P46734 347 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 FAM201AQ5SY85 155 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 LPCAT4Q643R3 524 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 ENTHD1Q8IYW4 607 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 BOLLQ8N9W6 283 aaKnown RBP21.12■□□□□ 0.97
PDF-201ENST00000288022 PIGCQ92535 297 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 GPR84Q9NQS5 396 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 RNF7Q9UBF6 113 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 OR52A1Q9UKL2 312 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 PPIAL4AQ9Y536 164 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 MPC1Q9Y5U8 109 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 ZFHX3Q15911 3703 aa21.12■□□□□ 0.97
PDF-201ENST00000288022 SONP18583 2426 aaKnown RBP21.12■□□□□ 0.97
PDF-201ENST00000288022 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP21.11■□□□□ 0.972e-10■■■□□ 15.6
PDF-201ENST00000288022 TRAV20A0A0B4J274 112 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 hCG_1807616A0A1W2PRN6 198 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 METTL15A6NJ78 407 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 ZNF850A8MQ14 1090 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 SRSF10O75494 262 aaKnown RBP21.11■□□□□ 0.97
PDF-201ENST00000288022 PTBP3O95758 552 aaKnown RBP21.11■□□□□ 0.97
PDF-201ENST00000288022 IL5RAQ01344 420 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 PRDX4Q13162 271 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 Q96MT0 163 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 RDH12Q96NR8 316 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 MICU1Q9BPX6 476 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 PATZ1Q9HBE1 687 aaKnown RBP21.11■□□□□ 0.97
PDF-201ENST00000288022 SNX5Q9Y5X3 404 aa21.11■□□□□ 0.97
PDF-201ENST00000288022 CST4P01036 141 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 TTRP02766 147 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 PEX2P28328 305 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 ACTC1P68032 377 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 ACTA1P68133 377 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 LCN2P80188 198 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 ZNF826PQ6ZT77 177 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 FAM220AQ7Z4H9 259 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 THAP5Q7Z6K1 395 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 C19orf18Q8NEA5 215 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 RTL8AQ9BWD3 113 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 TMEM165Q9HC07 324 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 ABCB9Q9NP78 766 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 G6PC2Q9NQR9 355 aa21.1■□□□□ 0.97
PDF-201ENST00000288022 ZNF816-ZNF321PA0A0X1KG74 233 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 DAPL1A0PJW8 107 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 ERICH4A6NGS2 130 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 CEACAM18A8MTB9 384 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 SLC16A6O15403 523 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 SULT1C4O75897 302 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 GABRB1P18505 474 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 ZNF85Q03923 595 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 LIPNQ5VXI9 398 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 FAHD2BQ6P2I3 314 aaPredicted RBP21.09■□□□□ 0.97
PDF-201ENST00000288022 ELMOD2Q8IZ81 293 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 DEFB108BQ8NET1 73 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 SEMA6DQ8NFY4 1073 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 RHOXF1Q8NHV9 184 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 FAHD2AQ96GK7 314 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 HIST1H2AAQ96QV6 131 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 C8orf4Q9NR00 106 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 GNG8Q9UK08 70 aa21.09■□□□□ 0.97
PDF-201ENST00000288022 MTRF1O75570 445 aaKnown RBP21.08■□□□□ 0.97
PDF-201ENST00000288022 FAM157CP0CG43 387 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 ATP6V1B1P15313 513 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 RPS2P15880 293 aaKnown RBP21.08■□□□□ 0.97
PDF-201ENST00000288022 SRD5A1P18405 259 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 ZNF91Q05481 1191 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 RIPPLY1Q0D2K3 151 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 ZNF404Q494X3 552 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 TP53I3Q53FA7 332 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 ZNF684Q5T5D7 378 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 KCTD8Q6ZWB6 473 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 WDR86Q86TI4 376 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 PRIMA1Q86XR5 153 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 ZDHHC23Q8IYP9 409 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 PACRGLQ8N7B6 248 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 OR1M1Q8NGA1 313 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 CYGBQ8WWM9 190 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 ITPKCQ96DU7 683 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 TMEM246Q9BRR3 403 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 SLC22A13Q9Y226 551 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 PIGLQ9Y2B2 252 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 PCDHGB1Q9Y5G3 927 aa21.08■□□□□ 0.97
PDF-201ENST00000288022 P2RY10O00398 339 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 DLGAP1O14490 977 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 FOXH1O75593 365 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 IGLV3-1P01715 115 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 CD80P33681 288 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 HOXA4Q00056 320 aaPredicted RBP21.07■□□□□ 0.96
PDF-201ENST00000288022 ODF4Q2M2E3 257 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 ESCO2Q56NI9 601 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 OR5P3Q8WZ94 311 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 ITFG2Q969R8 447 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 LGALS12Q96DT0 336 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 RNF170Q96K19 258 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 AMBNQ9NP70 447 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 MIOXQ9UGB7 285 aa21.07■□□□□ 0.96
PDF-201ENST00000288022 A0A0G2JMP0 313 aa21.06■□□□□ 0.96
PDF-201ENST00000288022 A0A0X1KG70 313 aa21.06■□□□□ 0.96
PDF-201ENST00000288022 DHRS3O75911 302 aa21.06■□□□□ 0.96
PDF-201ENST00000288022 FSTL3O95633 263 aa21.06■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms