RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 HPNP05981 417 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 CFPP27918 469 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ACTBP60709 375 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ZP1P60852 638 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ACTG1P63261 375 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 SLC10A1Q14973 349 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 IDO2Q6ZQW0 420 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 TMEM59Q9BXS4 323 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 OR51B6Q9H340 312 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 UPB1Q9UBR1 384 aa15.68■□□□□ 0.1
CAPN1-201ENST00000279247 ACACAQ13085 2346 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 WISP2O76076 250 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 BPNT1O95861 308 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 C1QBP02746 253 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 VSIG10L2P0DP72 767 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 SCRN3Q0VDG4 424 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 RAB35Q15286 201 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 RBMS2Q15434 407 aaKnown RBP15.67■□□□□ 0.1
CAPN1-201ENST00000279247 PABPC1L2AQ5JQF8 200 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 FOXL2NBQ6ZUU3 175 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 GLRX5Q86SX6 157 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 UQCC2Q9BRT2 126 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 TAS2R8Q9NYW2 309 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 MGAT4CQ9UBM8 478 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 MGAT4AQ9UM21 535 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF133P52736 654 aaPredicted RBP15.67■□□□□ 0.1
CAPN1-201ENST00000279247 C4orf46Q504U0 113 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 ASCC1Q8N9N2 400 aaKnown RBP15.67■□□□□ 0.1
CAPN1-201ENST00000279247 FDCSPQ8NFU4 85 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 MAFIPQ8WZ33 124 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 S100A13Q99584 98 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 CA10Q9NS85 328 aa15.67■□□□□ 0.1
CAPN1-201ENST00000279247 PIEZO2Q9H5I5 2752 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 A0A0A6YYD4 124 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 NME2P1O60361 137 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 FARS2O95363 451 aaKnown RBP15.66■□□□□ 0.1
CAPN1-201ENST00000279247 CD79AP11912 226 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF708P17019 499 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 NME2P22392 152 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 ERP29P30040 261 aaKnown RBP15.66■□□□□ 0.1
CAPN1-201ENST00000279247 CD276Q5ZPR3 534 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 PNLDC1Q8NA58 520 aaKnown RBP15.66■□□□□ 0.1
CAPN1-201ENST00000279247 OR11H4Q8NGC9 324 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 OR2T35Q8NGX2 323 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 OR2H1Q9GZK4 316 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 WNT5BQ9H1J7 359 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 IFT46Q9NQC8 304 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 SPRY1O43609 319 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-201ENST00000279247 TAS2R19P59542 299 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 QRFPP83859 136 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 BPIFB2Q8N4F0 458 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 MDS2Q8NDY4 140 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 OR51T1Q8NGJ9 327 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 IP6K3Q96PC2 410 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 MICU1Q9BPX6 476 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 LPAR5Q9H1C0 372 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF552Q9H707 407 aaPredicted RBP15.66■□□□□ 0.1
CAPN1-201ENST00000279247 TIMM10BQ9Y5J6 103 aa15.66■□□□□ 0.1
CAPN1-201ENST00000279247 LRP3O75074 770 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 CST2P09228 141 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 TNK1Q13470 666 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF260Q3ZCT1 412 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF529Q6P280 563 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 NUFIP2Q7Z417 695 aaKnown RBP15.65■□□□□ 0.1
CAPN1-201ENST00000279247 MED12LQ86YW9 2145 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF100Q8IYN0 542 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 DLL3Q9NYJ7 618 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 CDC14BO60729 498 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 TMEM225BP0DP42 221 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 SSTR2P30874 369 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 METTL11BQ5VVY1 283 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 CPEB3Q8NE35 698 aaKnown RBP15.65■□□□□ 0.1
CAPN1-201ENST00000279247 SEMA6DQ8NFY4 1073 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 OR10R2Q8NGX6 335 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 ZNF431Q8TF32 576 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-201ENST00000279247 TMEM165Q9HC07 324 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 MRPS18CQ9Y3D5 142 aaKnown RBP15.65■□□□□ 0.1
CAPN1-201ENST00000279247 CREBL2O60519 120 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-201ENST00000279247 CCL1P22362 96 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 CRYGSP22914 178 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 OTX1P32242 354 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-201ENST00000279247 MTCP1P56278 107 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 GNG2P59768 71 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 HIST1H3AP68431 136 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 HIST2H3PS2Q5TEC6 136 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 GLDNQ6ZMI3 551 aaPredicted RBP15.65■□□□□ 0.1
CAPN1-201ENST00000279247 DNM1P46Q6ZS02 220 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 HIST2H3AQ71DI3 136 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 RAB3CQ96E17 227 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 ARHGAP5-AS1Q96IT6 56 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 SLC6A7Q99884 636 aa15.65■□□□□ 0.1
CAPN1-201ENST00000279247 TM4SF5O14894 197 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 ZZEF1O43149 2961 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 MTRF1O75570 445 aaKnown RBP15.64■□□□□ 0.09
CAPN1-201ENST00000279247 TGM6O95932 706 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 PMP2P02689 132 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 CTSSP25774 331 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 PTGFRP43088 359 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 ECH1Q13011 328 aa15.64■□□□□ 0.09
CAPN1-201ENST00000279247 ARFRP1Q13795 201 aa15.64■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms