RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 MYO7BQ6PIF6 2116 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 NKAIN3Q8N8D7 197 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 OR10H5Q8NGA6 315 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 OR5D14Q8NGL3 314 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 RLN3Q8WXF3 142 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 ERGIC1Q969X5 290 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 A0A0A6YYH2 397 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 IGHV3-20A0A0C4DH32 117 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 A6NJ64 397 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF878C9JN71 531 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 DIRAS3O95661 229 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 CD5P06127 495 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 SNU13P55769 128 aaKnown RBP11.44□□□□□ -0.58
COL8A1-202ENST00000273342 TAS2R31P59538 309 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 QRFPP83859 136 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 PDZD11Q5EBL8 140 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 CDPF1Q6NVV7 123 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 FAHD2BQ6P2I3 314 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-202ENST00000273342 FAHD2AQ96GK7 314 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 C2orf50Q96LR7 162 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 TMEM59Q9BXS4 323 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 PUS1Q9Y606 427 aaKnown RBP eCLIP11.44□□□□□ -0.58
COL8A1-202ENST00000273342 OR8U8P0C7N1 319 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 CRABP1P29762 137 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 GSK3AP49840 483 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 DVL1P1P54792 670 aaPredicted RBP11.44□□□□□ -0.58
COL8A1-202ENST00000273342 PNLIPRP3Q17RR3 467 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 BTNL8Q6UX41 500 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 C15orf54Q8N8G6 183 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 HSD17B11Q8NBQ5 300 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 ADAMTS18Q8TE60 1221 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 REEP6Q96HR9 211 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 MRGPRX1Q96LB2 322 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 MMP24Q9Y5R2 645 aa11.44□□□□□ -0.58
COL8A1-202ENST00000273342 LOC390937A0A1W2PQ73 354 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 HSPB2A8KAH6 182 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 SLC33A1O00400 549 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-202ENST00000273342 TNFP01375 233 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF708P17019 499 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 PGCP20142 388 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 PRSS12P56730 875 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 SLC26A5P58743 744 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 HSPB2Q16082 182 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 C1QL2Q7Z5L3 287 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 LYPD6Q86Y78 171 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF561Q8N587 486 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 C11orf40Q8WZ69 217 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF775Q96BV0 537 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-202ENST00000273342 AQP10Q96PS8 301 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 CRISPLD2Q9H0B8 497 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 RAB18Q9NP72 206 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 URGCP-MRPS24S4R325 110 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 PMS2P1A4D2B8 440 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 MFNGO00587 321 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 UBE2CO00762 179 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 NSA2O95478 260 aaKnown RBP11.43□□□□□ -0.58
COL8A1-202ENST00000273342 S100A8P05109 93 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 HIST1H1DP16402 221 aaKnown RBP11.43□□□□□ -0.58
COL8A1-202ENST00000273342 RAB5AP20339 215 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 HSD11B1P28845 292 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 TSPO2Q5TGU0 170 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 GKN2Q86XP6 184 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 LURAP1LQ8IV03 231 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 ARHGEF39Q8N4T4 335 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 APCDD1LQ8NCL9 501 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 OR51T1Q8NGJ9 327 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 TOMM40LQ969M1 308 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 SAT2Q96F10 170 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-202ENST00000273342 HDHD3Q9BSH5 251 aaPredicted RBP11.43□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF319Q9P2F9 582 aa11.43□□□□□ -0.58
COL8A1-202ENST00000273342 C5orf63A6NC05 138 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 ATXN7O15265 892 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-202ENST00000273342 BPNT1O95861 308 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 SERPINA2P20848 420 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 LAP3P28838 519 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 BIDP55957 195 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 MFAP5Q13361 173 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 C1orf189Q5VU69 101 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 AADACL3Q5VUY0 350 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 EIF5AL1Q6IS14 154 aaKnown RBP11.42□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF600Q6ZNG1 722 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF565Q8N9K5 539 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 DTWD2Q8NBA8 298 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 POC1AQ8NBT0 407 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 OR9K2Q8NGE7 335 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 LIN37Q96GY3 246 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-202ENST00000273342 SH3BGRL3Q9H299 93 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 ZNF107Q9UII5 783 aaPredicted RBP11.42□□□□□ -0.58
COL8A1-202ENST00000273342 FREM2Q5SZK8 3169 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 IGKV1D-8A0A087WSZ0 117 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 A8MVM7 634 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 UMAD1C9J7I0 102 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 CDC14BO60729 498 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 DXOO77932 396 aaKnown RBP11.42□□□□□ -0.58
COL8A1-202ENST00000273342 MT-ND4LP03901 98 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 SULT1A2P50226 295 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 ACY1Q03154 408 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 GUK1Q16774 197 aa11.42□□□□□ -0.58
COL8A1-202ENST00000273342 MRPL24Q96A35 216 aaKnown RBP11.42□□□□□ -0.58
COL8A1-202ENST00000273342 GPR84Q9NQS5 396 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms