RNA–Protein interactions for RNA: ENST00000271628.8

SF3B4-201, Transcript of splicing factor 3b subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B4, Length 2,085 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B4-201ENST00000271628 OR4D6Q8NGJ1 314 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 MGAT4CQ9UBM8 478 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 MTFP1Q9UDX5 166 aa13.4□□□□□ -0.26
SF3B4-201ENST00000271628 METTL21EPA6NDL7 271 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 TUBAL3A6NHL2 446 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 M0R233 179 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 OR2A4O95047 310 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 WT1P19544 449 aaPredicted RBP13.4□□□□□ -0.27
SF3B4-201ENST00000271628 SSTR2P30874 369 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 TSPAN5P62079 268 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 CLN3Q13286 438 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 SIGIRRQ6IA17 410 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 SUN5Q8TC36 379 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 PP6455Q8WZ26 134 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 OR2A7Q96R45 310 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 CALHM2Q9HA72 323 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 SLC7A10Q9NS82 523 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 RAB22AQ9UL26 194 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 RHBDD3Q9Y3P4 386 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 V9GYS6 101 aa13.4□□□□□ -0.27
SF3B4-201ENST00000271628 TRAV18A0A075B6X5 111 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 TRAV17A0A0B4J275 112 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 OR6C6A6NF89 314 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF587BE7ETH6 402 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 PROB1E7EW31 1015 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 TOXO94900 526 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 BPNT1O95861 308 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 PDGFAP04085 211 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 DBHP09172 617 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 CSF1P09603 554 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 THBS4P35443 961 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 PSG4Q00888 419 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 RBMS2Q15434 407 aaKnown RBP13.39□□□□□ -0.27
SF3B4-201ENST00000271628 TOR2AQ5JU69 321 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 FAM209AQ5JX71 171 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 RAB12Q6IQ22 244 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 WDYHV1Q96HA8 205 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 SEC22CQ9BRL7 303 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 SOX7Q9BT81 388 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 TMPRSS13Q9BYE2 586 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 GP6Q9HCN6 339 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 UPB1Q9UBR1 384 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF69Q9UC07 566 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF391Q9UJN7 358 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 LIPGQ9Y5X9 500 aa13.39□□□□□ -0.27
SF3B4-201ENST00000271628 RPS10-NUDT3A0A1W2PQS6 291 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 DHRS7CA6NNS2 312 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 SULT1C2O00338 296 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 SCGNO76038 276 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 SDHBP21912 280 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 PRSS3P35030 304 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 SSBP1Q04837 148 aaKnown RBP13.38□□□□□ -0.27
SF3B4-201ENST00000271628 RNFT1Q5M7Z0 435 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF774Q6NX45 483 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 RFPL4BQ6ZWI9 263 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF627Q7L945 461 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.38□□□□□ -0.27
SF3B4-201ENST00000271628 SKA3Q8IX90 412 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 APH1AQ96BI3 265 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 LYZL4Q96KX0 146 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 GSX2Q9BZM3 304 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 OR2H1Q9GZK4 316 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 PIPOXQ9P0Z9 390 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 FBLN5Q9UBX5 448 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 TMA7Q9Y2S6 64 aaKnown RBP13.38□□□□□ -0.27
SF3B4-201ENST00000271628 CELSR3Q9NYQ7 3312 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 PLSCR5A0PG75 271 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 E9PLN8 166 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 PTHLHP12272 177 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 ANXA7P20073 488 aaKnown RBP13.38□□□□□ -0.27
SF3B4-201ENST00000271628 DEFB109BQ30KR1 87 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 PCGF3Q3KNV8 242 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 ANGPTL5Q86XS5 388 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 NKX3-1Q99801 234 aaPredicted RBP13.38□□□□□ -0.27
SF3B4-201ENST00000271628 COL25A1Q9BXS0 654 aaPredicted RBP13.38□□□□□ -0.27
SF3B4-201ENST00000271628 KCNK15Q9H427 330 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 ATPIF1Q9UII2 106 aa13.38□□□□□ -0.27
SF3B4-201ENST00000271628 CEACAM4O75871 244 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 KDM4BO94953 1096 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 IGHV3-9P01782 118 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 HCKP08631 526 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 HTR5AP47898 357 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 FAM189A2Q15884 450 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 KRTAP27-1Q3LI81 207 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 FAAP20Q6NZ36 180 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 BIVMQ86UB2 503 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 OR5AS1Q8N127 324 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 CHIAQ9BZP6 476 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF175Q9Y473 711 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 CSAG2Q9Y5P2 127 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 CNOT1A5YKK6 2376 aaKnown RBP13.37□□□□□ -0.27
SF3B4-201ENST00000271628 ZNF407Q9C0G0 2248 aa13.37□□□□□ -0.27
SF3B4-201ENST00000271628 ZFHX2Q9C0A1 2572 aaPredicted RBP13.37□□□□□ -0.27
SF3B4-201ENST00000271628 UBE2QL1A1L167 161 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 IGHG3P01860 377 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 MMP7P09237 267 aaPredicted RBP13.36□□□□□ -0.27
SF3B4-201ENST00000271628 FCGR2AP12318 317 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 ANOS1P23352 680 aa13.36□□□□□ -0.27
SF3B4-201ENST00000271628 NFYAP23511 347 aaPredicted RBP13.36□□□□□ -0.27
SF3B4-201ENST00000271628 HOXD11P31277 338 aaPredicted RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms