RNA–Protein interactions for RNA: ENST00000267199.8

VPS33A-201, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS33A, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-201ENST00000267199 CCR5P51681 352 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 SLC35A1P78382 337 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 FMODQ06828 376 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 WDR5BQ86VZ2 330 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 IL22RA1Q8N6P7 574 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 MOGAT1Q96PD6 335 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 STRADBQ9C0K7 418 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 PBOV1Q9GZY1 135 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 TMPRSS5Q9H3S3 457 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 CACNA1DQ01668 2161 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 CELA2BP08218 269 aaPredicted RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 TLE1Q04724 770 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 SSBP1Q04837 148 aaKnown RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 TOMM34Q15785 309 aaPredicted RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF660Q6AZW8 331 aaPredicted RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 WDR88Q6ZMY6 472 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 BAGE3Q86Y29 109 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 BAGE2Q86Y30 109 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 NAT6Q93015 286 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 PHYHIPLQ96FC7 376 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 PRRX2Q99811 253 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF251Q9BRH9 671 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 DUSP23Q9BVJ7 150 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 S1PR5Q9H228 398 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 PLEKHA2Q9HB19 425 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 MRPS18AQ9NVS2 196 aaKnown RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 CES1P1Q9UKY3 287 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 A0A1W2PPQ1 181 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 TRAPPC2LH3BP13 241 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 HLA-HP01893 362 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 EDN3P14138 238 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 ABCD3P28288 659 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 APOBEC1P41238 236 aaKnown RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 RAB1AP62820 205 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 PSG6Q00889 435 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 AWAT1Q58HT5 328 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 STPG2Q8N412 459 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 C8orf44Q96CB5 159 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 LRRC61Q9BV99 259 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 KLF15Q9UIH9 416 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 TP53TG5Q9Y2B4 290 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 NYNRINQ9P2P1 1898 aaKnown RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 PSME4Q14997 1843 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 A8MXE2 369 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 DVL1P1P54792 670 aaPredicted RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 LTC4SQ16873 150 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 SLC16A14Q7RTX9 510 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 THNSL2Q86YJ6 484 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 LINC00518Q8N0U6 118 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 RGP1Q92546 391 aaPredicted RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 TAAR8Q969N4 342 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 UBL7Q96S82 380 aaPredicted RBP10.36□□□□□ -0.75
VPS33A-201ENST00000267199 FRRS1LQ9P0K9 344 aa10.36□□□□□ -0.75
VPS33A-201ENST00000267199 PIGBOS1A0A0B4J2F0 54 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 PNLIPRP2P54317 469 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 SLC37A1P57057 533 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 HBG1P69891 147 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 HBG2P69892 147 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 BAXQ07812 192 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ABHD17BQ5VST6 288 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 C1orf53Q5VUE5 145 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF610Q8N9Z0 462 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF576Q9H609 170 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 FBXL17Q9UF56 701 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 LAMP3Q9UQV4 416 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 TDRD6O60522 2096 aaKnown RBP10.35□□□□□ -0.75
VPS33A-201ENST00000267199 CST4P01036 141 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 SLC25A1P53007 311 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF528Q3MIS6 628 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 PDLIM3Q53GG5 364 aaPredicted RBP10.35□□□□□ -0.75
VPS33A-201ENST00000267199 FAM209BQ5JX69 171 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 PLXDC2Q6UX71 529 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 OVCH2Q7RTZ1 564 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 NEUROG3Q9Y4Z2 214 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF816-ZNF321PA0A0X1KG74 233 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 FRG2CA6NGY1 282 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ANGPTL7O43827 346 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 HLA-DQB1P01920 261 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 GP1BAP07359 652 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 MYF5P13349 255 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 AADACP22760 399 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 GDF1P27539 372 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 PEBP1P30086 187 aaKnown RBP10.35□□□□□ -0.75
VPS33A-201ENST00000267199 PTGFRP43088 359 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 FUT5Q11128 374 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 DOK3Q7L591 496 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 AAED1Q7RTV5 226 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ZNF321PQ8N8H1 164 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 BHLHE23Q8NDY6 225 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 SEMA6DQ8NFY4 1073 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 MVB12AQ96EY5 273 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 ARHGAP5-AS1Q96IT6 56 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 RASL12Q9NYN1 266 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 HAO2Q9NYQ3 351 aa10.35□□□□□ -0.75
VPS33A-201ENST00000267199 STRAPQ9Y3F4 350 aaKnown RBP10.35□□□□□ -0.75
VPS33A-201ENST00000267199 MFSD2BA6NFX1 497 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 HRKO00198 91 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 DFFBO76075 338 aa10.34□□□□□ -0.75
VPS33A-201ENST00000267199 TBPP20226 339 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms