RNA–Protein interactions for RNA: ENST00000264012.8

CDH3-201, Transcript of cadherin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDH3, Length 4,929 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3-201ENST00000264012 DTWD2Q8NBA8 298 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 SPSB1Q96BD6 273 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 PLK3Q9H4B4 646 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 PPP1R3CQ9UQK1 317 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 UNC13CQ8NB66 2214 aa12.52□□□□□ -0.41
CDH3-201ENST00000264012 TUBAL3A6NHL2 446 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 RAB27BO00194 218 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 SRD5A2P31213 254 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 GALNSP34059 522 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 MAGEB1P43366 347 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 ZNF85Q03923 595 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 ACOT7LQ6ZUV0 252 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 CPEB3Q8NE35 698 aaKnown RBP12.51□□□□□ -0.41
CDH3-201ENST00000264012 OR10D3Q8NH80 312 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 CLEC1BQ9P126 229 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 PTHLHP12272 177 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 S100A7AQ86SG5 101 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 ZNF321PQ8N8H1 164 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 TMEM52Q8NDY8 209 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 SLC30A7Q8NEW0 376 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 DUSP15Q9H1R2 295 aaPredicted RBP12.51□□□□□ -0.41
CDH3-201ENST00000264012 A0A1W2PQD3 144 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 HPNP05981 417 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 MEOX1P50221 254 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 PNLIPRP3Q17RR3 467 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 PRAMEF5Q5TYX0 476 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 PRAMEF6Q5VXH4 476 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 TMEM268Q5VZI3 342 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 FBXL14Q8N1E6 418 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 OR4S1Q8NGB4 309 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 OR1J1Q8NGS3 322 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 PTPMT1Q8WUK0 201 aaPredicted RBP12.51□□□□□ -0.41
CDH3-201ENST00000264012 RIMS4Q9H426 269 aaPredicted RBP12.51□□□□□ -0.41
CDH3-201ENST00000264012 ZNF768Q9H5H4 540 aaKnown RBP12.51□□□□□ -0.41
CDH3-201ENST00000264012 OPA3Q9H6K4 179 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 CES1P1Q9UKY3 287 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 GREB1LQ9C091 1923 aaPredicted RBP12.51□□□□□ -0.41
CDH3-201ENST00000264012 A0A1W2PPH5 198 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 LGALS4P56470 323 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 GSG1Q2KHT4 349 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 POC1BQ8TC44 478 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 MARC2Q969Z3 335 aa12.51□□□□□ -0.41
CDH3-201ENST00000264012 FOXS1O43638 330 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 ADRA2CP18825 462 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 OR2A2Q6IF42 318 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 LYG2Q86SG7 212 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 TMEM229BQ8NBD8 167 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 GPX8Q8TED1 209 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 RTN4IP1Q8WWV3 396 aaPredicted RBP12.5□□□□□ -0.41
CDH3-201ENST00000264012 RNPS1Q15287 305 aaKnown RBP12.5□□□□□ -0.41
CDH3-201ENST00000264012 KCNRGQ8N5I3 272 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 ZNF680Q8NEM1 530 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 OR2G3Q8NGZ4 309 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 TERB2Q8NHR7 220 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 C10orf90Q96M02 699 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 TECTBQ96PL2 329 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 UHRF2Q96PU4 802 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 DNAJC13O75165 2243 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 RPS10-NUDT3A0A1W2PQS6 291 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 MPZL1O95297 269 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 ZNF32P17041 273 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 RPS10P46783 165 aaKnown RBP12.5□□□□□ -0.41
CDH3-201ENST00000264012 GPM6AP51674 278 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 OR2B11Q5JQS5 317 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 HES3Q5TGS1 186 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 OR52B4Q8NGK2 314 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 SUCNR1Q9BXA5 334 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 SLC17A5Q9NRA2 495 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 TDRD15B5MCY1 1934 aaKnown RBP12.5□□□□□ -0.41
CDH3-201ENST00000264012 TRGV8A0A0C4DH27 118 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 TERTO14746 1132 aaKnown RBP12.5□□□□□ -0.41
CDH3-201ENST00000264012 APOA2P02652 100 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 CT45A8P0DMV1 189 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 CT45A9P0DMV2 189 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 PIGPP57054 158 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 LSM11P83369 360 aaKnown RBP eCLIP12.5□□□□□ -0.41
CDH3-201ENST00000264012 SIGLEC14Q08ET2 396 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 FOXC1Q12948 553 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 TRIP6Q15654 476 aaKnown RBP12.5□□□□□ -0.41
CDH3-201ENST00000264012 CT45A2Q5DJT8 189 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 YIPF5Q969M3 257 aa12.5□□□□□ -0.41
CDH3-201ENST00000264012 TINAGL1Q9GZM7 467 aaPredicted RBP12.5□□□□□ -0.41
CDH3-201ENST00000264012 IGKV1-8A0A0C4DH67 115 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 TCRBV16S1A1N1A0A5B0 115 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 HMGN3Q15651 99 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 KISS1Q15726 138 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 ZNF774Q6NX45 483 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 JMJD6Q6NYC1 403 aaPredicted RBP12.49□□□□□ -0.41
CDH3-201ENST00000264012 HPSE2Q8WWQ2 592 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 UQCC2Q9BRT2 126 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 ATP6V1G2-DDX39BF2Z307 99 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 PYCARD-AS1I3L0S3 204 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 CRYABP02511 175 aaKnown RBP12.49□□□□□ -0.41
CDH3-201ENST00000264012 C1QCP02747 245 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 GPR12P47775 334 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 ETFDHQ16134 617 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 FAM122BQ7Z309 247 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 ARRDC1Q8N5I2 433 aa12.49□□□□□ -0.41
CDH3-201ENST00000264012 RBMXL3Q8N7X1 1067 aaKnown RBP12.49□□□□□ -0.41
CDH3-201ENST00000264012 CT55Q8WUE5 264 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms