RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 KLHL13Q9P2N7 655 aa10.97□□□□□ -0.65
CHMP3-201ENST00000263856 FER1L5A0AVI2 2057 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 C5orf63A6NC05 138 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 SFT2D2O95562 160 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 CX3CR1P49238 355 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 MMP16P51512 607 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 ZNF41P51814 821 aaPredicted RBP10.96□□□□□ -0.65
CHMP3-201ENST00000263856 TMEM50BP56557 158 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 FXYD4P59646 89 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 RNF4P78317 190 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 SP6Q3SY56 376 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 CHCHD2P9Q5T1J5 151 aaPredicted RBP10.96□□□□□ -0.65
CHMP3-201ENST00000263856 Q6ZRG5 221 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 C1QL2Q7Z5L3 287 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 OR13G1Q8NGZ3 307 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 NANPQ8TBE9 248 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 DDIT4LQ96D03 193 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 PGAM5Q96HS1 289 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 NRIP2Q9BQI9 281 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 METTL7AQ9H8H3 244 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 CLEC1BQ9P126 229 aa10.96□□□□□ -0.65
CHMP3-201ENST00000263856 LOC390937A0A1W2PQ73 354 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 FTCDNL1E5RQL4 147 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 TO15178 435 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 NME2P1O60361 137 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 CPT2P23786 658 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 LAP3P28838 519 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 MYBPHQ13203 477 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 PRAMEF20Q5VT98 475 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 NECAB3Q96P71 396 aaPredicted RBP10.96□□□□□ -0.66
CHMP3-201ENST00000263856 LPAR3Q9UBY5 353 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 ATPIF1Q9UII2 106 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 NCOA6Q14686 2063 aaPredicted RBP10.96□□□□□ -0.66
CHMP3-201ENST00000263856 FAM221AA4D161 298 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 SLC33A1O00400 549 aaPredicted RBP10.96□□□□□ -0.66
CHMP3-201ENST00000263856 RAMP1O60894 148 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 CFPP27918 469 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 CD38P28907 300 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 RFC3P40938 356 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 FASLGP48023 281 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 CSNK1EP49674 416 aaKnown RBP10.96□□□□□ -0.66
CHMP3-201ENST00000263856 BRICD5Q6PL45 260 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 DTWD2Q8NBA8 298 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 SLC30A7Q8NEW0 376 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 TSTD1Q8NFU3 115 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 KCNG3Q8TAE7 436 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 SECTM1Q8WVN6 248 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 URM1Q9BTM9 101 aaKnown RBP10.96□□□□□ -0.66
CHMP3-201ENST00000263856 NMES1Q9C002 83 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 GPR132Q9UNW8 380 aa10.96□□□□□ -0.66
CHMP3-201ENST00000263856 C14orf166Q9Y224 244 aaKnown RBP10.96□□□□□ -0.66
CHMP3-201ENST00000263856 TRBV11-1A0A0K0K1C0 115 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 RNASEK-C17orf49H0YIS7 233 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 F2RL1P55085 397 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 GABREP78334 506 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 HSD11B2P80365 405 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 SMCO1Q147U7 214 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 C14orf28Q4W4Y0 310 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 PRSS54Q6PEW0 395 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 PEG10Q86TG7 708 aaKnown RBP10.95□□□□□ -0.66
CHMP3-201ENST00000263856 OR10A2Q9H208 303 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 FGF21Q9NSA1 209 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 CYB5R1Q9UHQ9 305 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 LHFPL6Q9Y693 200 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 IGKV3D-11A0A0A0MRZ8 115 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 A0A1W2PQD3 144 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 TMEM14DPA8MWL7 114 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 LINC01387J3KSC0 135 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 FGF16O43320 207 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 XRCC2O43543 280 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 PRH1P02810 166 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 FCGR2AP12318 317 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 FAHP16930 419 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 ASCL1P50553 236 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 SUPT4H1P63272 117 aaKnown RBP10.95□□□□□ -0.66
CHMP3-201ENST00000263856 C6orf201Q7Z4U5 140 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 C20orf196Q8IYI0 205 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 EIF5A2Q9GZV4 153 aaKnown RBP10.95□□□□□ -0.66
CHMP3-201ENST00000263856 ATG2AQ2TAZ0 1938 aa10.95□□□□□ -0.66
CHMP3-201ENST00000263856 IGHV3-15A0A0B4J1V0 119 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 K7EPK0 472 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 OR8U9P0C7N5 309 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 OPRM1P35372 400 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 QRFPP83859 136 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 OR5AS1Q8N127 324 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 FAM71E2Q8N5Q1 922 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 OR8U1Q8NH10 309 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 STT3BQ8TCJ2 826 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 WDR77Q9BQA1 342 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-201ENST00000263856 UQCC2Q9BRT2 126 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF2Q9BSG1 426 aaPredicted RBP10.94□□□□□ -0.66
CHMP3-201ENST00000263856 PCDHGA1Q9Y5H4 931 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 ZNF726A6NNF4 738 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 DIRAS3O95661 229 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 QDPRP09417 244 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 C17orf67Q0P5P2 114 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 MST1LQ2TV78 715 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 RBMS3Q6XE24 437 aaKnown RBP10.94□□□□□ -0.66
CHMP3-201ENST00000263856 OR56B1Q8NGI3 324 aa10.94□□□□□ -0.66
CHMP3-201ENST00000263856 SFT2D1Q8WV19 159 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms