RNA–Protein interactions for RNA: ENST00000263559.10

VPS26A-201, Transcript of VPS26, retromer complex component A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS26A, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-201ENST00000263559 FBLN5Q9UBX5 448 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 ZNF391Q9UJN7 358 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 ELF5Q9UKW6 265 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-201ENST00000263559 SVILO95425 2214 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 TRAV6A0A075B6T7 132 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 hCG_38984A0A1B0GV85 526 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 GUSBP1Q15486 140 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 SFRP4Q6FHJ7 346 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-201ENST00000263559 TMEM53Q6P2H8 277 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 TFAP2EQ6VUC0 442 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 C9orf106Q8NAJ2 232 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 DRAXINQ8NBI3 349 aaPredicted RBP13.72□□□□□ -0.21
VPS26A-201ENST00000263559 ALG5Q9Y673 324 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 APC2O95996 2303 aa13.72□□□□□ -0.21
VPS26A-201ENST00000263559 SDHBP21912 280 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 PCGF3Q3KNV8 242 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 FAAP20Q6NZ36 180 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 C1QL2Q7Z5L3 287 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 ZNF584Q8IVC4 421 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 SPACA3Q8IXA5 215 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 GPX8Q8TED1 209 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 CMBLQ96DG6 245 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 SEH1LQ96EE3 360 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 NUBP2Q9Y5Y2 271 aa13.71□□□□□ -0.21
VPS26A-201ENST00000263559 A0A1W2PP11 408 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 XRCC2O43543 280 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 CCNKO75909 580 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 PTGFRP43088 359 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 PLEKHN1Q494U1 663 aaPredicted RBP13.71□□□□□ -0.22
VPS26A-201ENST00000263559 OR2W3Q7Z3T1 314 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 PNLDC1Q8NA58 520 aaKnown RBP13.71□□□□□ -0.22
VPS26A-201ENST00000263559 AKAP1Q92667 903 aaKnown RBP eCLIP13.71□□□□□ -0.22
VPS26A-201ENST00000263559 WNT2BQ93097 391 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 NICN1Q9BSH3 213 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 LUZP4Q9P127 313 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 LHX6Q9UPM6 363 aa13.71□□□□□ -0.22
VPS26A-201ENST00000263559 HMX3A6NHT5 357 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 FCER2P06734 321 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 EIF2S3P41091 472 aaKnown RBP13.7□□□□□ -0.22
VPS26A-201ENST00000263559 VEGFCP49767 419 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 BTG1P62324 171 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 ACSF3Q4G176 576 aaPredicted RBP13.7□□□□□ -0.22
VPS26A-201ENST00000263559 RAB12Q6IQ22 244 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 ZNF585AQ6P3V2 769 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 CNEP1R1Q8N9A8 125 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 KCNG3Q8TAE7 436 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 SPSB4Q96A44 273 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 POM121L2Q96KW2 1035 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 LPAR5Q9H1C0 372 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 BANF2Q9H503 90 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 COPZ2Q9P299 210 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 BOD1L1Q8NFC6 3051 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 NAP1L6A6NFF2 107 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 AHRRA9YTQ3 701 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 CDC14BO60729 498 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 MPIG6BO95866 241 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 NAT2P11245 290 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 IGHV1-2P23083 117 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 HLA-DMAP28067 261 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 KIR2DL2P43627 348 aaPredicted RBP13.7□□□□□ -0.22
VPS26A-201ENST00000263559 PLP2Q04941 152 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 OR8B8Q15620 311 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 GSG1Q2KHT4 349 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 TBRG1Q3YBR2 411 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 OLFML2AQ68BL7 652 aa13.7□□□□□ -0.22
VPS26A-201ENST00000263559 TMEM235A6NFC5 223 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 MKRN2OSH3BPM6 223 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 EIF2B2P49770 351 aaKnown RBP13.69□□□□□ -0.22
VPS26A-201ENST00000263559 ZNF260Q3ZCT1 412 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 SLC22A6Q4U2R8 563 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 CLVS2Q5SYC1 327 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 TMEM42Q69YG0 159 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 CHST4Q8NCG5 386 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 TNFAIP8L1Q8WVP5 186 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 AQP3Q92482 292 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 MS4A3Q96HJ5 214 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 MCUBQ9NWR8 336 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 DKK4Q9UBT3 224 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 ING4Q9UNL4 249 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 ACACAQ13085 2346 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 OR14I1A6ND48 311 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 SULT1C2O00338 296 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 LPLP06858 475 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 CSF1P09603 554 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 UBBP0CG47 229 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 ALDH3B1P43353 468 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 CDNFQ49AH0 187 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 VWA1Q6PCB0 445 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 Q6ZTK2 550 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 BTN2A1Q7KYR7 527 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 OR6F1Q8NGZ6 308 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 ABHD17AQ96GS6 310 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 TAS2R8Q9NYW2 309 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 DMXL2Q8TDJ6 3036 aa13.69□□□□□ -0.22
VPS26A-201ENST00000263559 A0A0A6YYD4 124 aa13.68□□□□□ -0.22
VPS26A-201ENST00000263559 CRTAPO75718 401 aaPredicted RBP13.68□□□□□ -0.22
VPS26A-201ENST00000263559 NRASP01111 189 aa13.68□□□□□ -0.22
VPS26A-201ENST00000263559 FOXF2Q12947 444 aa13.68□□□□□ -0.22
VPS26A-201ENST00000263559 RPUSD3Q6P087 351 aaKnown RBP13.68□□□□□ -0.22
VPS26A-201ENST00000263559 DPPA2Q7Z7J5 298 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms