RNA–Protein interactions for RNA: ENST00000263388.6

NOTCH3-201, Transcript of notch 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH3, Length 8,666 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH3-201ENST00000263388 TPOP07202 933 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 ST8SIA2Q92186 375 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 SPNS1Q9H2V7 528 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 PSENENQ9NZ42 101 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 ZNF121P58317 390 aaPredicted RBP15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 PTPRDP23468 1912 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 TNFSF11O14788 317 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 FGF7P21781 194 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 GPR119Q8TDV5 335 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 FBXW5Q969U6 566 aa15.82■□□□□ 0.12
NOTCH3-201ENST00000263388 TCRBV5S2A0A599 114 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 SIRT6Q8N6T7 355 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 OR2G2Q8NGZ5 317 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 RPUSD4Q96CM3 377 aaKnown RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 ST3GAL6Q9Y274 331 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 BCL2L11O43521 198 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 OPRM1P35372 400 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 ZBTB37Q5TC79 503 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 CMTM3Q96MX0 182 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 PCED1AQ9H1Q7 454 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 KLF13Q9Y2Y9 288 aaPredicted RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 LBHQ53QV2 105 aaPredicted RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 PTCRAQ6ISU1 281 aaPredicted RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 YRDCQ86U90 279 aaKnown RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 OR13C5Q8NGS8 318 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 PTDSS2Q9BVG9 487 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 ISG20L2Q9H9L3 353 aaKnown RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 PARD6AQ9NPB6 346 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 CLEC18AA5D8T8 446 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 OR5G3P0C626 314 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 NME1P15531 152 aaKnown RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 FA2HQ7L5A8 372 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 CLEC18CQ8NCF0 446 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 OR4S1Q8NGB4 309 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 SMIM4Q8WVI0 70 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 FRG2CA6NGY1 282 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 PRRG2O14669 202 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 EXOSC2Q13868 293 aaKnown RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 LCN15Q6UWW0 184 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 C16orf52Q8NHV5 167 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 FOXJ3Q9UPW0 622 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 CD37P11049 281 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 HIST1H3AP68431 136 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 VWA1Q6PCB0 445 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 TEX261Q6UWH6 196 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 RIMKLAQ8IXN7 391 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 OR52N5Q8NH56 324 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 PP6455Q8WZ26 134 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 U3KQ87 197 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 GPR37O15354 613 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 IGLV3-27P01718 113 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 GALP22466 123 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 CEBPEQ15744 281 aa15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 ASTLQ6HA08 431 aaPredicted RBP15.81■□□□□ 0.12
NOTCH3-201ENST00000263388 SULT1A2P50226 295 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 DRAM2Q6UX65 266 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 BAP18Q8IXM2 172 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 WDR61Q9GZS3 305 aaKnown RBP15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 AQP7P3A6NL99 342 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 B4GALT3O60512 393 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 ARRB2P32121 409 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 AQP6Q13520 282 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 TMEM88Q6PEY1 159 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 TIPARPQ7Z3E1 657 aaKnown RBP15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 CLRN3Q8NCR9 226 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 WFDC5Q8TCV5 224 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 KCNJ3P48549 501 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 OR2A1Q8NGT9 310 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 ATOH1Q92858 354 aaPredicted RBP15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 SDCBPO00560 298 aaPredicted RBP15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 MPGP29372 298 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 KHDC1LQ5JSQ8 128 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 OR1J1Q8NGS3 322 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 BSGP35613 385 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 SHBQ15464 509 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 TMEM229BQ8NBD8 167 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 MRPS24Q96EL2 167 aaKnown RBP15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 FAM24AA6NFZ4 105 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 CD3DP04234 171 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 ANKRD16Q6P6B7 361 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 OSR2Q8N2R0 312 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 COMMD1Q8N668 190 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 OR2M3Q8NG83 312 aa15.8■□□□□ 0.12
NOTCH3-201ENST00000263388 OR10G3Q8NGC4 313 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 SLC17A5Q9NRA2 495 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 PNLIPRP2P54317 469 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 OLIG3Q7RTU3 272 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 TIMM9Q9Y5J7 89 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 ORM1P02763 201 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 HAAOP46952 286 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 FUT6P51993 359 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 LINC00615Q96LM1 132 aaPredicted RBP15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 MMP26Q9NRE1 261 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 YIF1AO95070 293 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 AREGP15514 252 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 BTG2P78543 158 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 MARCH1Q8TCQ1 289 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 AAMDCQ9H7C9 122 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 FAM166BA8MTA8 275 aa15.79■□□□□ 0.12
NOTCH3-201ENST00000263388 HMGA1P17096 107 aaKnown RBP15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms