RNA–Protein interactions for RNA: ENST00000258733.8

GPNMB-201, Transcript of glycoprotein nmb, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GPNMB, Length 2,862 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-201ENST00000258733 ENDOGQ14249 297 aaKnown RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 HLA-BQ31612 363 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 GKN2Q86XP6 184 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 CLEC1AQ8NC01 280 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 OR5AP2Q8NGF4 316 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 ESAMQ96AP7 390 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 PEBP4Q96S96 227 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 FIZ1Q96SL8 496 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 OR51I2Q9H344 312 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 MRPL16Q9NX20 251 aaKnown RBP6.88□□□□□ -1.31
GPNMB-201ENST00000258733 UQCR10Q9UDW1 63 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 FBXO4Q9UKT5 387 aa6.88□□□□□ -1.31
GPNMB-201ENST00000258733 IGHV1-69-2A0A0G2JMI3 117 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 RNF222A6NCQ9 220 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF727A8MUV8 499 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 SELPP16109 830 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ATF1P18846 271 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ARL2P36404 184 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 GFRA1P56159 465 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 RPL7AP62424 266 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 RPL23AP62750 156 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 KLF9Q13886 244 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 QRICH1Q2TAL8 776 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 RNASE12Q5GAN4 147 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 FAM102AQ5T9C2 384 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 LHX8Q68G74 356 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 AMMECR1LQ6DCA0 310 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 PARS2Q7L3T8 475 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 CTU1Q7Z7A3 348 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 APOBEC3FQ8IUX4 373 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 FADS6Q8N9I5 356 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 OR2T33Q8NG76 320 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 OR52I1Q8NGK6 324 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 OR52I2Q8NH67 350 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 OR2AE1Q8NHA4 323 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 GPR119Q8TDV5 335 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF587Q96SQ5 575 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 PRDM12Q9H4Q4 367 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 MAGIXQ9H6Y5 334 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ELL3Q9HB65 397 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 Q9N2K0 584 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 FNDC3AQ9Y2H6 1198 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 hCG_1818297A0A087WSY0 165 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 A0A087WWC5 75 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 MYADML2A6NDP7 307 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 B3GALT2O43825 422 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF865P0CJ78 1059 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 HOXB6P17509 224 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ELAVL4P26378 380 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 GABRA3P34903 492 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ADCYAP1R1P41586 468 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 C1DQ13901 141 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 FAM78BQ5VT40 261 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 Q7L0L9 218 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 TCTEX1D1Q8N7M0 179 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 NOXO1Q8NFA2 376 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 HAVCR2Q8TDQ0 301 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 RBM24Q9BX46 236 aaKnown RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 VN1R1Q9GZP7 353 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 TM7SF3Q9NS93 570 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 DMAC2Q9NW81 257 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ERG28Q9UKR5 140 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 A0A096LPK6 155 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 MATN4O95460 622 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 C1QTNF9P0C862 333 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 B4GALT1P15291 398 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ACP1P24666 158 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 SEC61GP60059 68 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM267Q0VDI3 215 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 CD300EQ496F6 205 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 C1orf189Q5VU69 101 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 ZNF776Q68DI1 518 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 Q6ZN92 141 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 DPY19L4Q7Z388 723 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 CLEC14AQ86T13 490 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 YAF2Q8IY57 180 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 TEX26Q8N6G2 289 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 PNPLA1Q8N8W4 532 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 NPEPL1Q8NDH3 523 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 OR52E4Q8NGH9 312 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 KISS1RQ969F8 398 aaPredicted RBP6.87□□□□□ -1.31
GPNMB-201ENST00000258733 LMLNQ96KR4 655 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 TSSK2Q96PF2 358 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 GABARAPL3Q9BY60 117 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 CTDSP1Q9GZU7 261 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 CALHM2Q9HA72 323 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 LRTM1Q9HBL6 345 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 AIG1Q9NVV5 245 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 RAI2Q9Y5P3 530 aa6.87□□□□□ -1.31
GPNMB-201ENST00000258733 TMEM213A2RRL7 107 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 GAGE12HA6NDE8 117 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 SMIM9A6NGZ8 99 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 A6NIN4 97 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 C19orf67A6NJJ6 358 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 H3BQ15 152 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 EIF4EP06730 217 aaKnown RBP6.86□□□□□ -1.31
GPNMB-201ENST00000258733 CTSLP07711 333 aa6.86□□□□□ -1.31
GPNMB-201ENST00000258733 CDKN2AP42771 156 aaKnown RBP6.86□□□□□ -1.31
GPNMB-201ENST00000258733 PRLHRP49683 370 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms