RNA–Protein interactions for RNA: ENST00000254480.9

SMARCC1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCC1, Length 6,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-201ENST00000254480 OR10AD1Q8NGE0 317 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 OR10Z1Q8NGY1 313 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 EID2BQ96D98 161 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 ZNF835Q9Y2P0 537 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 ALG1L2C9J202 215 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 HMGN3Q15651 99 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 LIMS2Q7Z4I7 341 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 C1orf87Q8N0U7 546 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 DNAJC13O75165 2243 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 GIPP09681 153 aaPredicted RBP16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 CA6P23280 308 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 BTG1P62324 171 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 PHYHD1Q5SRE7 291 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 RXFP4Q8TDU9 374 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 MPZL1O95297 269 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 EPXP11678 715 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 CSN1S1P47710 185 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 GPNMBQ14956 572 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 DRAM2Q6UX65 266 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 ZNF331Q9NQX6 463 aaPredicted RBP16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 UMAD1C9J7I0 102 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 C3AR1Q16581 482 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 GSG1Q2KHT4 349 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 SOX7Q9BT81 388 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 ADAT1Q9BUB4 502 aaKnown RBP16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 OCEL1Q9H607 264 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 CLEC1BQ9P126 229 aa16.78■□□□□ 0.28
SMARCC1-201ENST00000254480 MT-CO3P00414 261 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 FBXL14Q8N1E6 418 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 TMEM230Q96A57 120 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 FN3KRPQ9HA64 309 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 KCNIP2Q9NS61 270 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 A0A087WZY1 265 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 CST7O76096 145 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 OR2C1O95371 312 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 CISD3P0C7P0 127 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 SPINK9Q5DT21 86 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 OR5B3Q8NH48 314 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 RTN4IP1Q8WWV3 396 aaPredicted RBP16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 ZDHHC16Q969W1 377 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 YIPF6Q96EC8 236 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 SLC25A32Q9H2D1 315 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 LIN7CQ9NUP9 197 aaKnown RBP16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 MT-ND4LP03901 98 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 FAM58AQ8N1B3 248 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 OR1F12Q8NHA8 337 aa16.77■□□□□ 0.28
SMARCC1-201ENST00000254480 ERHP84090 104 aaKnown RBP16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 TAGLNQ01995 201 aaKnown RBP16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 KIAA0141Q14154 515 aaPredicted RBP16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 B3GNTL1Q67FW5 361 aaPredicted RBP16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 SPINK14Q6IE38 97 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 FAM60AQ9NP50 221 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 OR6C68A6NDL8 312 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 ONECUT2O95948 504 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 FOSL1P15407 271 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF774Q6NX45 483 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 ANKRD37Q7Z713 158 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 LHX4Q969G2 390 aa16.77■□□□□ 0.27
SMARCC1-201ENST00000254480 A0A1W2PRD5 423 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 A0A1W2PRF3 423 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 A0A1W2PRM7 423 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 ADH4P08319 380 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 CT62P0C5K7 136 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 AVPR2P30518 371 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 STUMQ69YW2 141 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 RCL1Q9Y2P8 373 aaKnown RBP16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 IGHV1OR21-1A0A087WYE8 117 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 AQP8O94778 261 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 SLC39A7Q92504 469 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 WBP1LQ9NX94 342 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 STRAPQ9Y3F4 350 aaKnown RBP16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 KRASP01116 189 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 AKR1C3P42330 323 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 PDZK1IP1Q13113 114 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF239Q16600 458 aaKnown RBP16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 LINC00303Q3SY05 128 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 GALMQ96C23 342 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 DLL4Q9NR61 685 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 IGHV1OR15-9A0A0B4J2B8 117 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 NTN1O95631 604 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 OR52N4Q8NGI2 321 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF416Q9BWM5 594 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 IGHV3-43A0A0B4J1X8 118 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 C20orf202A1L168 122 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 C1QBP02746 253 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 CT45A10P0DMU9 189 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 IGHV3-43DP0DP04 118 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 ATF1P18846 271 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 OR2B8PP59922 312 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF90Q03938 601 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 FAM122BQ7Z309 247 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 TTC9Q92623 222 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 WDR89Q96FK6 387 aaPredicted RBP16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 PLSCR3Q9NRY6 295 aa16.76■□□□□ 0.27
SMARCC1-201ENST00000254480 PWWP2BQ6NUJ5 590 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 LILRA6Q6PI73 481 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 BHLHA9Q7RTU4 235 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 OTOSQ8NHW6 89 aa16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 ZNF707Q96C28 371 aaPredicted RBP16.75■□□□□ 0.27
SMARCC1-201ENST00000254480 ARHGDIGQ99819 225 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms