RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 CD300LDQ6UXZ3 194 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 ERI1Q8IV48 349 aaKnown RBP17.43■□□□□ 0.38
NEDD8-201ENST00000250495 C11orf53Q8IXP5 236 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 CSNK2A3Q8NEV1 391 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 OR6N2Q8NGY6 317 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 OR4F5Q8NH21 305 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 TEX47Q8TBZ9 253 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 TBC1D15Q8TC07 691 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 RNF133Q8WVZ7 376 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 ABHD6Q9BV23 337 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 CNTD2Q9H8S5 307 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 MARCH7Q9H992 704 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 ACOXLQ9NUZ1 547 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 VNN3Q9NY84 501 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 TRRAPQ9Y4A5 3859 aa17.43■□□□□ 0.38
NEDD8-201ENST00000250495 MELTFP08582 738 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 GSTT1P30711 240 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 GNALP38405 381 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 POU4F2Q12837 409 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 FAM57BQ71RH2 274 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 FTMTQ8N4E7 242 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 OR1M1Q8NGA1 313 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 OR10G2Q8NGC3 310 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 LRRC29Q8WV35 223 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 SSMEM1Q8WWF3 244 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 OTULINQ96BN8 352 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 CHIAQ9BZP6 476 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 SIRPDQ9H106 197 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 OR10A2Q9H208 303 aa17.42■□□□□ 0.38
NEDD8-201ENST00000250495 IGHV3OR15-7A0A075B7D8 119 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 IGHV1-69DA0A0B4J2H0 117 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 FAM183AA6NL82 134 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 H3BN98 237 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 GLCEO94923 617 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 KNG1P01042 644 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 IGHV1-69P01742 117 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 GSK3AP49840 483 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 RAG2P55895 527 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 ZNF121P58317 390 aaPredicted RBP17.41■□□□□ 0.38
NEDD8-201ENST00000250495 MS4A2Q01362 244 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 PRSS45Q7RTY3 260 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 SLC36A1Q7Z2H8 476 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 HIST2H2ABQ8IUE6 130 aaPredicted RBP17.41■□□□□ 0.38
NEDD8-201ENST00000250495 GIPC3Q8TF64 312 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 ST8SIA4Q92187 359 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 LHX4Q969G2 390 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 DMRTB1Q96MA1 342 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 NIPSNAP1Q9BPW8 284 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 RGCCQ9H4X1 137 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 MED20Q9H944 212 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 DNAJC27Q9NZQ0 273 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 RPUSD1Q9UJJ7 312 aaKnown RBP17.41■□□□□ 0.38
NEDD8-201ENST00000250495 PKD1L1Q8TDX9 2849 aa17.41■□□□□ 0.38
NEDD8-201ENST00000250495 hCG_38984A0A1B0GV85 526 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 NDUFA7O95182 113 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 H2BFMP0C1H6 154 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 RAP2AP10114 183 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 PAICSP22234 425 aaKnown RBP17.4■□□□□ 0.38
NEDD8-201ENST00000250495 RPL15P61313 204 aaKnown RBP17.4■□□□□ 0.38
NEDD8-201ENST00000250495 WDR82Q6UXN9 313 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 C17orf107Q6ZR85 190 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 WDR86Q86TI4 376 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 KIR3DL3Q8N743 410 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 C12orf43Q96C57 262 aaKnown RBP17.4■□□□□ 0.38
NEDD8-201ENST00000250495 PGAM5Q96HS1 289 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 LRGUKQ96M69 825 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 FEVQ99581 238 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 CCL13Q99616 98 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 MICU1Q9BPX6 476 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 C1RLQ9NZP8 487 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 PRPF19Q9UMS4 504 aaKnown RBP17.4■□□□□ 0.38
NEDD8-201ENST00000250495 KPTNQ9Y664 436 aa17.4■□□□□ 0.38
NEDD8-201ENST00000250495 ANXA2P2A6NMY6 339 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 GPR37O15354 613 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 FCN3O75636 299 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 OPRL1P41146 370 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 IL5RAQ01344 420 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 GFOD2Q3B7J2 385 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 CDONQ4KMG0 1287 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 OLFML2AQ68BL7 652 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 TIGD4Q8IY51 512 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 GALNT4Q8N4A0 578 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 SCCPDHQ8NBX0 429 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 DYRK2Q92630 601 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 PAPOLGQ9BWT3 736 aaKnown RBP17.39■□□□□ 0.37
NEDD8-201ENST00000250495 OR51V1Q9H2C8 321 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 BRD7Q9NPI1 651 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 ZNF319Q9P2F9 582 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 RHBDD3Q9Y3P4 386 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 MPC1Q9Y5U8 109 aa17.39■□□□□ 0.37
NEDD8-201ENST00000250495 CDIPTO14735 213 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 KCNAB3O43448 404 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 CST1P01037 141 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 CSNK2BP67870 215 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 KLHL12Q53G59 568 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 WDR38Q5JTN6 314 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 IQCF1Q8N6M8 205 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 ZNF454Q8N9F8 522 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 LY6G5BQ8NDX9 201 aa17.38■□□□□ 0.37
NEDD8-201ENST00000250495 AMELYQ99218 206 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms