RNA–Protein interactions for RNA: ENST00000249923.7

COPB1-201, Transcript of coatomer protein complex subunit beta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COPB1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-201ENST00000249923 LPAR5Q9H1C0 372 aa8.94□□□□□ -0.98
COPB1-201ENST00000249923 ZNF629Q9UEG4 869 aaPredicted RBP8.94□□□□□ -0.98
COPB1-201ENST00000249923 IGKV1-9A0A0C4DH69 117 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 TRBV11-1A0A0K0K1C0 115 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 SDCBPO00560 298 aaPredicted RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 NQO2P16083 231 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 APOBEC1P41238 236 aaKnown RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 CBX5P45973 191 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 OR3A4PP47883 348 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 NPBWR1P48145 328 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 DAP3P51398 398 aaKnown RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 SRSF3P84103 164 aaKnown RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 HNF4GQ14541 408 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 C9orf152Q5JTZ5 239 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 FAM209BQ5JX69 171 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 DEGS2Q6QHC5 323 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 NAA40Q86UY6 237 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 NKAIN3Q8N8D7 197 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 SSC4DQ8WTU2 575 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 SPSB2Q99619 263 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 FSCN3Q9NQT6 498 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 CSAG2Q9Y5P2 127 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 CFAP47Q6ZTR5 3102 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 A0A1W2PQM1 296 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 C9orf170A2RU37 121 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 A6NIZ1 184 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 DBX1A6NMT0 343 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 MPTX1A8MV57 137 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 C1orf196B1AJZ1 125 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 SOCS1O15524 211 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 ZNF205O95201 554 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 MPZP25189 248 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 HSD11B1P28845 292 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 CASRP41180 1078 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 OR3A2P47893 321 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 RAB13P51153 203 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 TMEM50BP56557 158 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 RAB5BP61020 215 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 RAP1BP61224 184 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 RAP1AP62834 184 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 AVPI1Q5T686 147 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 PHF19Q5T6S3 580 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 ZNF704Q6ZNC4 412 aaPredicted RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 CARFQ8N187 725 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 OR8B12Q8NGG6 310 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 SLC22A8Q8TCC7 542 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 ARL11Q969Q4 196 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 TLNRD1Q9H1K6 362 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 RASL12Q9NYN1 266 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 LSM5Q9Y4Y9 91 aaKnown RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 LINC00587B1AMM8 73 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 ABCD4O14678 606 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 EFSO43281 561 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 SYT7O43581 403 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 SIGLEC6O43699 453 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 OR2J2O76002 312 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 CELA2AP08217 269 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 AGTR1P30556 359 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 ESPL1Q14674 2120 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 TMEM244Q5VVB8 128 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 C11orf87Q6NUJ2 197 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 LYG2Q86SG7 212 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 KCNRGQ8N5I3 272 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 WDSUB1Q8N9V3 476 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 LILRB1Q8NHL6 650 aaPredicted RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 MITD1Q8WV92 249 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 TMEM234Q8WY98 164 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 TCEAL3Q969E4 200 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 TMEM230Q96A57 120 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 FOXRED1Q96CU9 486 aaPredicted RBP8.93□□□□□ -0.98
COPB1-201ENST00000249923 ALKBH4Q9NXW9 302 aa8.93□□□□□ -0.98
COPB1-201ENST00000249923 DNASE2O00115 360 aaPredicted RBP8.92□□□□□ -0.98
COPB1-201ENST00000249923 SULT2B1O00204 365 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 MSTNO14793 375 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 APOC1P02654 83 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 ERCC1P07992 297 aaPredicted RBP8.92□□□□□ -0.98
COPB1-201ENST00000249923 LAP3P28838 519 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 USF2Q15853 346 aaPredicted RBP8.92□□□□□ -0.98
COPB1-201ENST00000249923 NKAIN1Q4KMZ8 207 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 CARD17Q5XLA6 110 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 C5orf46Q6UWT4 87 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 C1QL2Q7Z5L3 287 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 ANGPTL5Q86XS5 388 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 EIF4E3Q8N5X7 224 aaKnown RBP8.92□□□□□ -0.98
COPB1-201ENST00000249923 JSRP1Q96MG2 331 aaPredicted RBP8.92□□□□□ -0.98
COPB1-201ENST00000249923 SLCO5A1Q9H2Y9 848 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 ZNF701Q9NV72 531 aaPredicted RBP8.92□□□□□ -0.98
COPB1-201ENST00000249923 ASH2LQ9UBL3 628 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 ZNF107Q9UII5 783 aaPredicted RBP8.92□□□□□ -0.98
COPB1-201ENST00000249923 RAB22AQ9UL26 194 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 PI4KAP42356 2102 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 MEGF11A6BM72 1044 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 ZNF878C9JN71 531 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 ADAP1O75689 374 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 STK17BO94768 372 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 MPIG6BO95866 241 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 MGMTP16455 207 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 HLA-GP17693 338 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 ASCL1P50553 236 aa8.92□□□□□ -0.98
COPB1-201ENST00000249923 HIST3H3Q16695 136 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms