RNA–Protein interactions for RNA: ENST00000241393.3

CXCR4-201, Transcript of C-X-C motif chemokine receptor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CXCR4, Length 1,682 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4-201ENST00000241393 EXPH5Q8NEV8 1989 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 ALPK2Q86TB3 2170 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 LOC102725191A0A1B0GVB3 256 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 B3GALNT1O75752 331 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 TOXO94900 526 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CYB5AP00167 134 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CD3DP04234 171 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 RLN1P04808 185 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 ERCC1P07992 297 aaPredicted RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 HLA-DOBP13765 273 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CXCL2P19875 107 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 TBPP20226 339 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 BCKDHBP21953 392 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 BDKRB2P30411 391 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 SSTR2P30874 369 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 S100A11P31949 105 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 MPLP40238 635 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 EMP2P54851 167 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 DCDP81605 110 aaKnown RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 POU3F1Q03052 451 aaPredicted RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 SRSF4Q08170 494 aaKnown RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 PMPCAQ10713 525 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 EIF3IQ13347 325 aaKnown RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 FAM189A2Q15884 450 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 PLPPR5Q32ZL2 321 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 NHLRC3Q5JS37 347 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CLVS2Q5SYC1 327 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 OR5M10Q6IEU7 315 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CRIP3Q6Q6R5 217 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 KLHL24Q6TFL4 600 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 ZSCAN2Q7Z7L9 614 aaPredicted RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 SLC22A8Q8TCC7 542 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 TNFAIP8L1Q8WVP5 186 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 AQP3Q92482 292 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 ARL5BQ96KC2 179 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 C5orf34Q96MH7 638 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 SFXN2Q96NB2 322 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 FOXN4Q96NZ1 517 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 WDR77Q9BQA1 342 aaPredicted RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CHIAQ9BZP6 476 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 EXO5Q9H790 373 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM138Q9NPI0 162 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 MED11Q9P086 117 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CYB5R1Q9UHQ9 305 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 NUP50Q9UKX7 468 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 RARRES3Q9UL19 164 aa6.91□□□□□ -1.3
CXCR4-201ENST00000241393 MRPS18BQ9Y676 258 aaKnown RBP6.91□□□□□ -1.3
CXCR4-201ENST00000241393 CACNA1CQ13936 2221 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 UNC13CQ8NB66 2214 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 IGHV3-20A0A0C4DH32 117 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 TRBV11-1A0A0K0K1C0 115 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF736B4DX44 427 aaPredicted RBP6.9□□□□□ -1.3
CXCR4-201ENST00000241393 DISC1C4P0D8 188 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 MPZL1O95297 269 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 CFDP00746 253 aaPredicted RBP6.9□□□□□ -1.3
CXCR4-201ENST00000241393 IGHG1P01857 330 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 ACSM4P0C7M7 580 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 NR2C1P13056 603 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 RPA2P15927 270 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 IL11P20809 199 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 LAP3P28838 519 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 AGTR1P30556 359 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 EIF1P41567 113 aaKnown RBP6.9□□□□□ -1.3
CXCR4-201ENST00000241393 FGL1Q08830 312 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 SHBQ15464 509 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 C3orf33Q6P1S2 294 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 TMEM81Q6P7N7 255 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 TSSK4Q6SA08 328 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 ZNF813Q6ZN06 617 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 MDGA2Q7Z553 956 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 CPEB2Q7Z5Q1 589 aaKnown RBP6.9□□□□□ -1.3
CXCR4-201ENST00000241393 COMMD7Q86VX2 200 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 MUC20Q8N307 709 aaPredicted RBP6.9□□□□□ -1.3
CXCR4-201ENST00000241393 SLC22A24Q8N4F4 322 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 JAGN1Q8N5M9 183 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 OR4D10Q8NGI6 311 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 C11orf40Q8WZ69 217 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 FAM46BQ96A09 425 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 SLAMF6Q96DU3 332 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 DNAJA3Q96EY1 480 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 PRR25Q96S07 402 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 PRRT1Q99946 306 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 KLRF1Q9NZS2 232 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 B3GAT1Q9P2W7 334 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 WIF1Q9Y5W5 379 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 CEP192Q8TEP8 1941 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 ADAMTS9Q9P2N4 1935 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 FREM3P0C091 2139 aa6.9□□□□□ -1.3
CXCR4-201ENST00000241393 PCNX3Q9H6A9 2034 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 CPED1A4D0V7 1026 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 VWC2LB2RUY7 222 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF878C9JN71 531 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 AP4M1O00189 453 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 SYT7O43581 403 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 RAD1O60671 282 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 ZNF354AO60765 605 aaPredicted RBP6.9□□□□□ -1.31
CXCR4-201ENST00000241393 RP2O75695 350 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 SCRG1O75711 98 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 TTRP02766 147 aa6.9□□□□□ -1.31
CXCR4-201ENST00000241393 OR4E1P0C645 316 aa6.9□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms