RNA–Protein interactions for RNA: ENST00000238616.9

NEK9-201, Transcript of NIMA related kinase 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEK9, Length 8,310 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-201ENST00000238616 DDOQ99489 341 aa11.98□□□□□ -0.49
NEK9-201ENST00000238616 LOC107986453A0A1B0GWG9 222 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 MRPS14O60783 128 aaKnown RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 TCRBP04435 133 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 OR5AL1P0C617 328 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 G6PCP35575 357 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 OR3A4PP47883 348 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 RXFP4Q8TDU9 374 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 CLDN23Q96B33 292 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 UBE2ZQ9H832 354 aaPredicted RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 LSM2Q9Y333 95 aaKnown RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 LGALS7P47929 136 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 TRMT12Q53H54 448 aaKnown RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 DRAXINQ8NBI3 349 aaPredicted RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 NIPSNAP1Q9BPW8 284 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 NKX6-2Q9C056 277 aaPredicted RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 A0A1W2PPQ1 181 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 TPBGQ13641 420 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 OR11G2Q8NGC1 345 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 LHX4Q969G2 390 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 SLC25A21Q9BQT8 299 aaPredicted RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 A4GALTQ9NPC4 353 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 MARCH5Q9NX47 278 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 A0A1W2PNV4 684 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 PHOX2AO14813 284 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 ST8SIA3O43173 380 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 ETV6P41212 452 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 ZNF252P-AS1Q0IIN9 211 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 LYG1Q8N1E2 194 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 COMMD1Q8N668 190 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 RAB1BQ9H0U4 201 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 C5orf52A6NGY3 159 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 TMEM200CA6NKL6 621 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 DRGXA6NNA5 263 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 JTBO76095 146 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 ORM2P19652 201 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 ARNTP27540 789 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 OR5R1Q8NH85 324 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 DUS3LQ96G46 650 aaKnown RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 RNF2Q99496 336 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 WDR61Q9GZS3 305 aaKnown RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 NIT2Q9NQR4 276 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 PDZK1IP1Q13113 114 aa11.97□□□□□ -0.49
NEK9-201ENST00000238616 KCTD12Q96CX2 325 aaKnown RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 EP300Q09472 2414 aaPredicted RBP11.97□□□□□ -0.49
NEK9-201ENST00000238616 CNOT1A5YKK6 2376 aaKnown RBP11.96□□□□□ -0.49
NEK9-201ENST00000238616 DOCK4Q8N1I0 1966 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 HAX1O00165 279 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 DSCR3O14972 297 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 ICMTO60725 284 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 CNN1P51911 297 aaKnown RBP11.96□□□□□ -0.49
NEK9-201ENST00000238616 BTG2P78543 158 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 TMEM88Q6PEY1 159 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 MRPL37Q9BZE1 423 aaKnown RBP11.96□□□□□ -0.49
NEK9-201ENST00000238616 NTN4Q9HB63 628 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 MBNL1Q9NR56 388 aaKnown RBP11.96□□□□□ -0.49
NEK9-201ENST00000238616 HS3ST3A1Q9Y663 406 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 ATXN7O15265 892 aaPredicted RBP11.96□□□□□ -0.49
NEK9-201ENST00000238616 ANKRD34CP0C6C1 535 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 SCGB1A1P11684 91 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 CEACAM6P40199 344 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 TCTN1Q2MV58 587 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 XKR7Q5GH72 579 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 ADAT1Q9BUB4 502 aaKnown RBP11.96□□□□□ -0.49
NEK9-201ENST00000238616 TRGV5A0A0B4J1U4 118 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 UBL3O95164 117 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 SLC2A10O95528 541 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 MBP02144 154 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 MGPP08493 103 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 FFAR4Q5NUL3 377 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 SLC48A1Q6P1K1 146 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 SIAH1Q8IUQ4 282 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 MS4A8Q9BY19 250 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 FBP1P09467 338 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 ETV1P50549 477 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 RELAQ04206 551 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 TMEM81Q6P7N7 255 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 SPRED1Q7Z699 444 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 PTRH1Q86Y79 214 aaKnown RBP11.96□□□□□ -0.49
NEK9-201ENST00000238616 CELF2-AS1Q8N7Q2 184 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 ADGRG7Q96K78 797 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 TREX1Q9NSU2 369 aa11.96□□□□□ -0.49
NEK9-201ENST00000238616 STRCQ7RTU9 1775 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 POM121BA6NF01 834 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 IHHQ14623 411 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 CCSMST1Q4G0I0 132 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 IL22RA2Q969J5 263 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 MED29Q9NX70 200 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 PPIL1Q9Y3C6 166 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 LINC01553A4QN01 128 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 UBE2MP61081 183 aaKnown RBP11.96□□□□□ -0.5
NEK9-201ENST00000238616 ZNF154Q13106 437 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 AGERQ15109 404 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 PDCD1Q15116 288 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 DEFB124Q8NES8 71 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 OR4F17Q8NGA8 305 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 SLC25A43Q8WUT9 341 aaPredicted RBP11.96□□□□□ -0.5
NEK9-201ENST00000238616 ELSPBP1Q96BH3 223 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 TGOLN2O43493 480 aa11.96□□□□□ -0.5
NEK9-201ENST00000238616 SULT1A1P50225 295 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 62.9 ms