RNA–Protein interactions for RNA: ENST00000229330.8

HCFC2-201, Transcript of host cell factor C2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HCFC2, Length 5,734 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2-201ENST00000229330 MMACHCQ9Y4U1 282 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 CDC42EP2O14613 210 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 MMP7P09237 267 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-201ENST00000229330 POU3F2P20265 443 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-201ENST00000229330 BTG2P78543 158 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 LAIR2Q6ISS4 152 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 NXPE3Q969Y0 559 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF775Q96BV0 537 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-201ENST00000229330 LAT2Q9GZY6 243 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 ARL2-SNX15V9GYD0 113 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 DOCK1Q14185 1865 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 CLN5O75503 358 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 GLRA1P23415 457 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 TMEM33P57088 247 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 LAIR1Q6GTX8 287 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 CPT1CQ8TCG5 803 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 ZFP64Q9NPA5 681 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 THAP10Q9P2Z0 257 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-201ENST00000229330 MYOTQ9UBF9 498 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 COL5A3P25940 1745 aaPredicted RBP12.43□□□□□ -0.42
HCFC2-201ENST00000229330 IAPPP10997 89 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 PTTG1IPP53801 180 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 THSD4Q6ZMP0 1018 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 TMEM104Q8NE00 496 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 OR11H4Q8NGC9 324 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 RAB33BQ9H082 229 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 PSENENQ9NZ42 101 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 SLCO1B1Q9Y6L6 691 aa12.43□□□□□ -0.42
HCFC2-201ENST00000229330 A0A1W2PPE2 198 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 FAM221AA4D161 298 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 HSD17B7P56937 341 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF77Q15935 545 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 OR52N4Q8NGI2 321 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 KLF15Q9UIH9 416 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 TNFSF18Q9UNG2 199 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 LRP12Q9Y561 859 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 J3QR89 54 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF749O43361 778 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 ASCL1P50553 236 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF660Q6AZW8 331 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-201ENST00000229330 FBXO17Q96EF6 278 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 PAPPA2Q9BXP8 1791 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 IGLV3-16A0A075B6K0 115 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 A0A087WUJ7 227 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 MED19A0JLT2 244 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-201ENST00000229330 SIGLEC5O15389 551 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 PTP4A3O75365 173 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 SLC25A4P12235 298 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 CXCL12P48061 93 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 NPBWR1P48145 328 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 SIGLEC14Q08ET2 396 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 AAED1Q7RTV5 226 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 ZG16BQ96DA0 208 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 PIK3IP1Q96FE7 263 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 NRSN2Q9GZP1 204 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 DLEC1Q9Y238 1755 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 TMEM241Q24JQ0 296 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 OR4D11Q8NGI4 311 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 AMDHD2Q9Y303 409 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 OPN1MWP04001 364 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 OPN1MW2P0DN77 364 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 OPN1MW3P0DN78 364 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 CCKARP32238 428 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 APOBEC1P41238 236 aaKnown RBP12.42□□□□□ -0.42
HCFC2-201ENST00000229330 ZFP36L2P47974 494 aaKnown RBP12.42□□□□□ -0.42
HCFC2-201ENST00000229330 NR0B2Q15466 257 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 GTF2H5Q6ZYL4 71 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 OR10P1Q8NGE3 313 aa12.42□□□□□ -0.42
HCFC2-201ENST00000229330 LINC00615Q96LM1 132 aaPredicted RBP12.42□□□□□ -0.42
HCFC2-201ENST00000229330 ARPC3O15145 178 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 PPM1DO15297 605 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 ADAP1O75689 374 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 WISP3O95389 354 aaPredicted RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 CD38P28907 300 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 SP6Q3SY56 376 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 NUP214P35658 2090 aaPredicted RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 IRF2P14316 349 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 NHLRC3Q5JS37 347 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 THEM4Q5T1C6 240 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 NSUN5P2Q63ZY6 315 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 OR2A1Q8NGT9 310 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 OR51F2Q8NH61 342 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 ATOH1Q92858 354 aaPredicted RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 MRPS24Q96EL2 167 aaKnown RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 ZNF576Q9H609 170 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 GPANK1O95872 356 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 HLA-DQB1P01920 261 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 CTGFP29279 349 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 LBHQ53QV2 105 aaPredicted RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 ABHD5Q8WTS1 349 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 TAAR9Q96RI9 348 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 NRIP2Q9BQI9 281 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 OBP2AQ9NY56 170 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 A0A1B0GTH9 108 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 H3BNC9 293 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 ABCD4O14678 606 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 HIST1H1DP16402 221 aaKnown RBP12.41□□□□□ -0.42
HCFC2-201ENST00000229330 TIGITQ495A1 244 aa12.41□□□□□ -0.42
HCFC2-201ENST00000229330 H2BFWTQ7Z2G1 175 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms